RNA–Protein interactions for RNA: ENST00000530790.5

VPS28-211, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-211ENST00000530790 STPG2Q8N412 459 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 COMMD1Q8N668 190 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 Q8N9W7 124 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 OR2AK2Q8NG84 335 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 OR51D1Q8NGF3 324 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 SETD6Q8TBK2 473 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 PHF21AQ96BD5 680 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 YPEL2Q96QA6 119 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 GFI1Q99684 422 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 RASL11BQ9BPW5 248 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 LPAR5Q9H1C0 372 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 ACOT13Q9NPJ3 140 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 LINC00527Q9UJ94 153 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 RAB26Q9ULW5 256 aa10.52□□□□□ -0.73
VPS28-211ENST00000530790 AK6Q9Y3D8 172 aaKnown RBP10.52□□□□□ -0.73
VPS28-211ENST00000530790 RRP9O43818 475 aaKnown RBP10.51□□□□□ -0.73
VPS28-211ENST00000530790 NAPSAO96009 420 aa10.51□□□□□ -0.73
VPS28-211ENST00000530790 RPL23AP62750 156 aaKnown RBP10.51□□□□□ -0.73
VPS28-211ENST00000530790 LY6G6FQ5SQ64 297 aa10.51□□□□□ -0.73
VPS28-211ENST00000530790 C5orf24Q7Z6I8 188 aa10.51□□□□□ -0.73
VPS28-211ENST00000530790 S1PR3Q99500 378 aa10.51□□□□□ -0.73
VPS28-211ENST00000530790 GON7Q9BXV9 100 aa10.51□□□□□ -0.73
VPS28-211ENST00000530790 MRPL20Q9BYC9 149 aaKnown RBP10.51□□□□□ -0.73
VPS28-211ENST00000530790 RIMS4Q9H426 269 aaPredicted RBP10.51□□□□□ -0.73
VPS28-211ENST00000530790 C12orf4Q9NQ89 552 aa10.51□□□□□ -0.73
VPS28-211ENST00000530790 NECAP2Q9NVZ3 263 aa10.51□□□□□ -0.73
VPS28-211ENST00000530790 TGP01266 2768 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 SAA2-SAA4A0A096LPE2 208 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 NUDT19A8MXV4 375 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 SOCS1O15524 211 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 PLXNB1O43157 2135 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 ATP6V1G2O95670 118 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 PRB2P02812 416 aaPredicted RBP10.5□□□□□ -0.73
VPS28-211ENST00000530790 SAA2P0DJI9 122 aaPredicted RBP10.5□□□□□ -0.73
VPS28-211ENST00000530790 PSMD7P51665 324 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 CLDN12P56749 244 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 MMDQ15546 238 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 ZNF880Q6PDB4 577 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 ZNF833PQ6ZTB9 187 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 ODF3L1Q8IXM7 274 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 FAM71E2Q8N5Q1 922 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 KLHL30-AS1Q8NEE0 82 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 WFDC9Q8NEX5 89 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 FAM3DQ96BQ1 224 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 RCC1LQ96I51 464 aaKnown RBP10.5□□□□□ -0.73
VPS28-211ENST00000530790 IFI27L2Q9H2X8 130 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 PLSCR3Q9NRY6 295 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 NDUFB11Q9NX14 153 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 AK3Q9UIJ7 227 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 MGAT4AQ9UM21 535 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 V9GY05 133 aa10.5□□□□□ -0.73
VPS28-211ENST00000530790 PRKDCP78527 4128 aaKnown RBP10.5□□□□□ -0.73
VPS28-211ENST00000530790 TRBV6-6A0A0A6YYG2 114 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 DUS4LO95620 317 aaKnown RBP10.49□□□□□ -0.73
VPS28-211ENST00000530790 IGLL1P15814 213 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 MYL9P24844 172 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 SLC6A1P30531 599 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 SOX6P35712 828 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 OR3A3P47888 321 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 VEGFCP49767 419 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 F2RL1P55085 397 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 GABARAPL2P60520 117 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 HLA-DRB3P79483 266 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 SSX1Q16384 188 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 FAM71F2Q6NXP2 309 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 TEX38Q6PEX7 206 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 Q6ZPA2 131 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 FAM89BQ8N5H3 189 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 OR56B1Q8NGI3 324 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 HDHD3Q9BSH5 251 aaPredicted RBP10.49□□□□□ -0.73
VPS28-211ENST00000530790 ZFP57Q9NU63 452 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 PIPOXQ9P0Z9 390 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 ZNF107Q9UII5 783 aaPredicted RBP10.49□□□□□ -0.73
VPS28-211ENST00000530790 HSF4Q9ULV5 492 aa10.49□□□□□ -0.73
VPS28-211ENST00000530790 LINC01548A6NM66 108 aa10.48□□□□□ -0.73
VPS28-211ENST00000530790 PDCD5O14737 125 aa10.48□□□□□ -0.73
VPS28-211ENST00000530790 ST8SIA5O15466 376 aa10.48□□□□□ -0.73
VPS28-211ENST00000530790 HSPA12AO43301 675 aa10.48□□□□□ -0.73
VPS28-211ENST00000530790 DENRO43583 198 aaKnown RBP10.48□□□□□ -0.73
VPS28-211ENST00000530790 SLC2A2P11168 524 aaPredicted RBP10.48□□□□□ -0.73
VPS28-211ENST00000530790 VDAC1P21796 283 aa10.48□□□□□ -0.73
VPS28-211ENST00000530790 ACTBP60709 375 aa10.48□□□□□ -0.73
VPS28-211ENST00000530790 MRPS15P82914 257 aaKnown RBP10.48□□□□□ -0.73
VPS28-211ENST00000530790 PNLIPRP3Q17RR3 467 aa10.48□□□□□ -0.73
VPS28-211ENST00000530790 CXorf66Q5JRM2 361 aaPredicted RBP10.48□□□□□ -0.73
VPS28-211ENST00000530790 HES5Q5TA89 166 aa10.48□□□□□ -0.73
VPS28-211ENST00000530790 C8orf86Q6ZUL3 223 aa10.48□□□□□ -0.73
VPS28-211ENST00000530790 RBMXL1Q96E39 390 aaKnown RBP10.48□□□□□ -0.73
VPS28-211ENST00000530790 NABP2Q9BQ15 211 aa10.48□□□□□ -0.73
VPS28-211ENST00000530790 CMSS1Q9BQ75 279 aaKnown RBP10.48□□□□□ -0.73
VPS28-211ENST00000530790 HSPB9Q9BQS6 159 aa10.48□□□□□ -0.73
VPS28-211ENST00000530790 ZNF251Q9BRH9 671 aa10.48□□□□□ -0.73
VPS28-211ENST00000530790 PECRQ9BY49 303 aa10.48□□□□□ -0.73
VPS28-211ENST00000530790 Q9H521 79 aa10.48□□□□□ -0.73
VPS28-211ENST00000530790 SLC23A1Q9UHI7 598 aa10.48□□□□□ -0.73
VPS28-211ENST00000530790 TRAV1-2A0A0B4J238 106 aa10.47□□□□□ -0.73
VPS28-211ENST00000530790 TMEM272A0A1B0GTI8 110 aa10.47□□□□□ -0.73
VPS28-211ENST00000530790 FOXI3A8MTJ6 420 aaPredicted RBP10.47□□□□□ -0.73
VPS28-211ENST00000530790 RAB29O14966 203 aa10.47□□□□□ -0.73
VPS28-211ENST00000530790 NBR2O15453 112 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms