RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 C9JQL5 133 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 C15orf65H3BRN8 121 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 K7EPK0 472 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 COPEO14579 308 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 ATRNO75882 1429 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 HBZP02008 142 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 MAS1P04201 325 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 ATP5G1P05496 136 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 OR5G3P0C626 314 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 CXCL3P19876 107 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 NTF3P20783 257 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 TGFBR2P37173 567 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 SPCS3P61009 180 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 EMX1Q04741 257 aaPredicted RBP2.55□□□□□ -2
C11orf88-204ENST00000529661 POU6F1Q14863 301 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 CENPWQ5EE01 88 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 ZNF773Q6PK81 442 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 ANKRD12Q6UB98 2062 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 LINC00596Q86U02 117 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 NAA40Q86UY6 237 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 TMEM86BQ8N661 226 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 APCDD1LQ8NCL9 501 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 ZNF555Q8NEP9 628 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 OR2D3Q8NGH3 330 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 OR11L1Q8NGX0 322 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 OR10X1Q8NGY0 326 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 NEK7Q8TDX7 302 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 ZNF721Q8TF20 911 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 Q8WTZ3 238 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 FAM172AQ8WUF8 416 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 GPR82Q96P67 336 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 OLFM3Q96PB7 478 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 OR51I2Q9H344 312 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 POMPQ9Y244 141 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 ZNF780BQ9Y6R6 833 aa2.55□□□□□ -2
C11orf88-204ENST00000529661 MYH3P11055 1940 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 ITGB4P16144 1822 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 ARAP3Q8WWN8 1544 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 CCDC144AA2RUR9 1427 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 NPATQ14207 1427 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 ZBED9Q6R2W3 1325 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 ARGFXA6NJG6 315 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 LGALS9O00182 355 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 PSMD12O00232 456 aaPredicted RBP2.54□□□□□ -2
C11orf88-204ENST00000529661 CHP2O43745 196 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 OR7C2O60412 319 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 NOS1APO75052 506 aaPredicted RBP2.54□□□□□ -2
C11orf88-204ENST00000529661 CNIH1O95406 144 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 CRYBA1P05813 215 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 SOD3P08294 240 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 OR4A8P0C604 315 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 SCGB1C2P0DMR2 95 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 ZNF708P17019 499 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 CXCL2P19875 107 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 GADD45AP24522 165 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 IMPA1P29218 277 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 ARPC4P59998 168 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 KRTAP10-10P60014 251 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 RPS24P62847 133 aaKnown RBP2.54□□□□□ -2
C11orf88-204ENST00000529661 HPCAP84074 193 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 RPL19P84098 196 aaKnown RBP2.54□□□□□ -2
C11orf88-204ENST00000529661 FUT5Q11128 374 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 RSU1Q15404 277 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 SLC9A3R2Q15599 337 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 BATFQ16520 125 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 KLHL12Q53G59 568 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 TRMT12Q53H54 448 aaKnown RBP2.54□□□□□ -2
C11orf88-204ENST00000529661 PYCR3Q53H96 274 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 HENMT1Q5T8I9 393 aaKnown RBP2.54□□□□□ -2
C11orf88-204ENST00000529661 NXNL2Q5VZ03 156 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 ELP2Q6IA86 826 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 PRSS54Q6PEW0 395 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 SLC25A34Q6PIV7 304 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 CYHR1Q6ZMK1 362 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 SLC36A1Q7Z2H8 476 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 S100A7AQ86SG5 101 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 NATD1Q8N6N6 113 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.54□□□□□ -2
C11orf88-204ENST00000529661 OR2Z1Q8NG97 314 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 OR1L8Q8NGR8 309 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 OR52N1Q8NH53 320 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 OR51H1Q8NH63 302 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 OR2V1Q8NHB1 315 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 FAM57AQ8TBR7 257 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 SPPL2BQ8TCT7 592 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 SCGB1C1Q8TD33 95 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 TWIST2Q8WVJ9 160 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 YIPF5Q969M3 257 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 SLC35B4Q969S0 331 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 FXYD5Q96DB9 178 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 ANAPC13Q9BS18 74 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 MARVELD1Q9BSK0 173 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 HES4Q9HCC6 221 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 GID8Q9NWU2 228 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 C14orf166Q9Y224 244 aaKnown RBP2.54□□□□□ -2
C11orf88-204ENST00000529661 PLXNB3Q9ULL4 1909 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 KIAA1671Q9BY89 1806 aa2.54□□□□□ -2
C11orf88-204ENST00000529661 NACADO15069 1562 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 TICRRQ7Z2Z1 1910 aa2.53□□□□□ -2
C11orf88-204ENST00000529661 MYH2Q9UKX2 1941 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms