RNA–Protein interactions for RNA: ENST00000529611.5

CCDC90B-213, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2 BASIC

Gene CCDC90B, Length 1,986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-213ENST00000529611 SCGB1D2O95969 90 aa12.85□□□□□ -0.35
CCDC90B-213ENST00000529611 GYPAP02724 150 aa12.85□□□□□ -0.35
CCDC90B-213ENST00000529611 IGHV3-43DP0DP04 118 aa12.85□□□□□ -0.35
CCDC90B-213ENST00000529611 EDDM3BP56851 147 aa12.85□□□□□ -0.35
CCDC90B-213ENST00000529611 HTD2P86397 168 aa12.85□□□□□ -0.35
CCDC90B-213ENST00000529611 TFF3Q07654 80 aa12.85□□□□□ -0.35
CCDC90B-213ENST00000529611 EFNB3Q15768 340 aa12.85□□□□□ -0.35
CCDC90B-213ENST00000529611 ESCO2Q56NI9 601 aa12.85□□□□□ -0.35
CCDC90B-213ENST00000529611 NMSQ5H8A3 153 aa12.85□□□□□ -0.35
CCDC90B-213ENST00000529611 ZNF645Q8N7E2 425 aa12.85□□□□□ -0.35
CCDC90B-213ENST00000529611 OR4D5Q8NGN0 318 aa12.85□□□□□ -0.35
CCDC90B-213ENST00000529611 PCNPQ8WW12 178 aaKnown RBP12.85□□□□□ -0.35
CCDC90B-213ENST00000529611 IL22RA2Q969J5 263 aa12.85□□□□□ -0.35
CCDC90B-213ENST00000529611 DYNLRB1Q9NP97 96 aa12.85□□□□□ -0.35
CCDC90B-213ENST00000529611 ACACBO00763 2458 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 TUBAL3A6NHL2 446 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 LRRC30A6NM36 301 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 K7EPK0 472 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 UBA52P62987 128 aaKnown RBP12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 ABCA4P78363 2273 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 CLLU1Q5K131 121 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 FAM71E2Q8N5Q1 922 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 ST8SIA2Q92186 375 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 C14orf79Q96F83 325 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 CCL13Q99616 98 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 ARPC5LQ9BPX5 153 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 ZNF471Q9BX82 626 aaPredicted RBP12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 GSX2Q9BZM3 304 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 OR2D2Q9H210 308 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 NCOR1P1Q9H4R4 102 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 ZNF665Q9H7R5 613 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 RNF150Q9ULK6 438 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 DSCAML1Q8TD84 2053 aa12.84□□□□□ -0.35
CCDC90B-213ENST00000529611 RLN2P04090 185 aa12.83□□□□□ -0.35
CCDC90B-213ENST00000529611 VDAC1P21796 283 aa12.83□□□□□ -0.35
CCDC90B-213ENST00000529611 NUP62P37198 522 aaPredicted RBP12.83□□□□□ -0.35
CCDC90B-213ENST00000529611 SMCO1Q147U7 214 aa12.83□□□□□ -0.35
CCDC90B-213ENST00000529611 FAM216BQ8N7L0 139 aa12.83□□□□□ -0.35
CCDC90B-213ENST00000529611 SCARB1Q8WTV0 552 aa12.83□□□□□ -0.35
CCDC90B-213ENST00000529611 C5orf30Q96GV9 206 aa12.83□□□□□ -0.35
CCDC90B-213ENST00000529611 MS4A5Q9H3V2 200 aa12.83□□□□□ -0.35
CCDC90B-213ENST00000529611 CISD1Q9NZ45 108 aaKnown RBP12.83□□□□□ -0.35
CCDC90B-213ENST00000529611 B9A039 149 aa12.83□□□□□ -0.36
CCDC90B-213ENST00000529611 F5H0A9 414 aaPredicted RBP12.83□□□□□ -0.36
CCDC90B-213ENST00000529611 ADAM20O43506 726 aa12.83□□□□□ -0.36
CCDC90B-213ENST00000529611 SERPINE2P07093 398 aa12.83□□□□□ -0.36
CCDC90B-213ENST00000529611 FAM234AQ9H0X4 552 aa12.83□□□□□ -0.36
CCDC90B-213ENST00000529611 LIN7CQ9NUP9 197 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-213ENST00000529611 OR6C3Q9NZP0 311 aa12.83□□□□□ -0.36
CCDC90B-213ENST00000529611 USF3Q68DE3 2245 aa12.83□□□□□ -0.36
CCDC90B-213ENST00000529611 SPTBN1Q01082 2364 aaKnown RBP12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 CLEC18AA5D8T8 446 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 DEFB108AA8MXU0 73 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 TMEM178BH3BS89 294 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 LGALS8O00214 317 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 SIGLEC5O15389 551 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 IGKV1-39P01597 117 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 IGKV1D-39P04432 117 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 CGB3P0DN86 165 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 CGB7P0DN87 165 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 HKR1P10072 659 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 S100A1P23297 94 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 LOXP28300 417 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 LTC4SQ16873 150 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 CLEC18CQ8NCF0 446 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 ZBTB34Q8NCN2 500 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 GALNT11Q8NCW6 608 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 FAM122AQ96E09 287 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 SPIN2AQ99865 258 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 SPIN2BQ9BPZ2 258 aa12.82□□□□□ -0.36
CCDC90B-213ENST00000529611 LINC00862A6NCI5 91 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 F2RL2O00254 374 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 RAB14P61106 215 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 EIF4EBP1Q13541 118 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 ZNF585BQ52M93 769 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 C1orf87Q8N0U7 546 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 CCL17Q92583 94 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 AGMATQ9BSE5 352 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 CYTL1Q9NRR1 136 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 ZFP57Q9NU63 452 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 TMEM106BQ9NUM4 274 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 CALYQ9NYX4 217 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 JPT1Q9UK76 154 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 POMT1Q9Y6A1 747 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 TRAV38-1A0A0B4J264 116 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 A0A0G2JRQ6 117 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 E5RGE8 158 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 ST8SIA3O43173 380 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 ZNF16P17020 682 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 LOXL3P58215 753 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 MSMO1Q15800 293 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 SWI5Q1ZZU3 235 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 ZNF672Q499Z4 452 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 ZNF808Q8N4W9 903 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 TMEM204Q9BSN7 226 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 PLEKHF2Q9H8W4 249 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 GNG12Q9UBI6 72 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 RCL1Q9Y2P8 373 aaKnown RBP12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 NSG2Q9Y328 171 aa12.81□□□□□ -0.36
CCDC90B-213ENST00000529611 TANC2Q9HCD6 1990 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms