RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	NQO2	P16083	231 aa		12.3	□□□□□ -0.44
NR1H3-231	ENST00000529540	APOBEC3A	P31941	199 aa	Predicted RBP	12.3	□□□□□ -0.44
NR1H3-231	ENST00000529540	FABP6	P51161	128 aa		12.3	□□□□□ -0.44
NR1H3-231	ENST00000529540	ERVS71-1	P61550	626 aa		12.3	□□□□□ -0.44
NR1H3-231	ENST00000529540	MZT1	Q08AG7	82 aa		12.3	□□□□□ -0.44
NR1H3-231	ENST00000529540	PSG7	Q13046	419 aa		12.3	□□□□□ -0.44
NR1H3-231	ENST00000529540	ZNF672	Q499Z4	452 aa	Predicted RBP	12.3	□□□□□ -0.44
NR1H3-231	ENST00000529540	VHLL	Q6RSH7	139 aa		12.3	□□□□□ -0.44
NR1H3-231	ENST00000529540	ABHD14B	Q96IU4	210 aa		12.3	□□□□□ -0.44
NR1H3-231	ENST00000529540	SYT3	Q9BQG1	590 aa		12.3	□□□□□ -0.44
NR1H3-231	ENST00000529540	RSRP1	Q9BUV0	290 aa		12.3	□□□□□ -0.44
NR1H3-231	ENST00000529540	PLK3	Q9H4B4	646 aa		12.3	□□□□□ -0.44
NR1H3-231	ENST00000529540		A0A087WWC5	75 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	ZNF850	A8MQ14	1090 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	PITX3	O75364	302 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	DIRAS3	O95661	229 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	NRAS	P01111	189 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	COX6B1	P14854	86 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	HOXA5	P20719	270 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	PPP1CC	P36873	323 aa	Known RBP	12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	FHIT	P49789	147 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	SRPX	P78539	464 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	EWSR1	Q01844	656 aa	Known RBP eCLIP	12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	SP6	Q3SY56	376 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	TMEM42	Q69YG0	159 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	OR2T2	Q6IF00	324 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	CLEC9A	Q6UXN8	241 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	SUMF2	Q8NBJ7	301 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	CD300LF	Q8TDQ1	290 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	TOMM40L	Q969M1	308 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	HIST1H2AA	Q96QV6	131 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	FAAP24	Q9BTP7	215 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	C20orf24	Q9BUV8	137 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	PAPOLG	Q9BWT3	736 aa	Known RBP	12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	SH3BGRL3	Q9H299	93 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	SLC2A9	Q9NRM0	540 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	GPR173	Q9NS66	373 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	CISD1	Q9NZ45	108 aa	Known RBP	12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	IL36G	Q9NZH8	169 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	DUSP13	Q9UII6	198 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	SLC7A11	Q9UPY5	501 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	FBXO7	Q9Y3I1	522 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	TRAV20	A0A0B4J274	112 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	SIAH2	O43255	324 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	TXNL1	O43396	289 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	OR2C1	O95371	312 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	CDS2	O95674	445 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	ARG1	P05089	322 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	LOX	P28300	417 aa	Predicted RBP	12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	MTCP1	P56278	107 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	ZNF266	Q14584	549 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	RSU1	Q15404	277 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	EFNB3	Q15768	340 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	SOHLH1	Q5JUK2	328 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	SP5	Q6BEB4	398 aa	Predicted RBP	12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	TMEM182	Q6ZP80	229 aa	Predicted RBP	12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	LHFPL2	Q6ZUX7	228 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	ZDHHC23	Q8IYP9	409 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	OR52M1	Q8NGK5	317 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	FAM213B	Q8TBF2	198 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	EDARADD	Q8WWZ3	215 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	ZNF286A	Q9HBT8	521 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	DMRT1	Q9Y5R6	373 aa		12.29	□□□□□ -0.44
NR1H3-231	ENST00000529540	SPTBN1	Q01082	2364 aa	Known RBP	12.28	□□□□□ -0.44
NR1H3-231	ENST00000529540		B9A039	149 aa		12.28	□□□□□ -0.44
NR1H3-231	ENST00000529540	WRB	O00258	174 aa		12.28	□□□□□ -0.44
NR1H3-231	ENST00000529540	OR4A8	P0C604	315 aa		12.28	□□□□□ -0.44
NR1H3-231	ENST00000529540	MPV17	P39210	176 aa		12.28	□□□□□ -0.44
NR1H3-231	ENST00000529540	GNMT	Q14749	295 aa		12.28	□□□□□ -0.44
NR1H3-231	ENST00000529540	ADIPOQ	Q15848	244 aa		12.28	□□□□□ -0.44
NR1H3-231	ENST00000529540	DMRTC1	Q5HYR2	192 aa		12.28	□□□□□ -0.44
NR1H3-231	ENST00000529540	FAM185A	Q8N0U4	392 aa		12.28	□□□□□ -0.44
NR1H3-231	ENST00000529540	FBXL14	Q8N1E6	418 aa		12.28	□□□□□ -0.44
NR1H3-231	ENST00000529540	HSD17B11	Q8NBQ5	300 aa		12.28	□□□□□ -0.44
NR1H3-231	ENST00000529540	POM121	Q96HA1	1249 aa		12.28	□□□□□ -0.44
NR1H3-231	ENST00000529540	DIRC2	Q96SL1	478 aa		12.28	□□□□□ -0.44
NR1H3-231	ENST00000529540	HIPK2	Q9H2X6	1198 aa		12.28	□□□□□ -0.44
NR1H3-231	ENST00000529540	HEATR1	Q9H583	2144 aa	Known RBP	12.27	□□□□□ -0.44
NR1H3-231	ENST00000529540	RBFOX3	A6NFN3	312 aa		12.27	□□□□□ -0.45
NR1H3-231	ENST00000529540	OR5B21	A6NL26	309 aa		12.27	□□□□□ -0.45
NR1H3-231	ENST00000529540	TRDC	B7Z8K6	153 aa		12.27	□□□□□ -0.45
NR1H3-231	ENST00000529540		E7EQL1	145 aa		12.27	□□□□□ -0.45
NR1H3-231	ENST00000529540	CLDN1	O95832	211 aa		12.27	□□□□□ -0.45
NR1H3-231	ENST00000529540	OR13C7	P0DN81	318 aa		12.27	□□□□□ -0.45
NR1H3-231	ENST00000529540	RAB2A	P61019	212 aa		12.27	□□□□□ -0.45
NR1H3-231	ENST00000529540	NHLH2	Q02577	135 aa		12.27	□□□□□ -0.45
NR1H3-231	ENST00000529540	TAF9	Q16594	264 aa		12.27	□□□□□ -0.45
NR1H3-231	ENST00000529540	SPSB3	Q6PJ21	355 aa		12.27	□□□□□ -0.45
NR1H3-231	ENST00000529540	PIGC	Q92535	297 aa		12.27	□□□□□ -0.45
NR1H3-231	ENST00000529540	MRPL37	Q9BZE1	423 aa	Known RBP	12.27	□□□□□ -0.45
NR1H3-231	ENST00000529540	KIAA1456	Q9P272	454 aa		12.27	□□□□□ -0.45
NR1H3-231	ENST00000529540	FAM221A	A4D161	298 aa		12.26	□□□□□ -0.45
NR1H3-231	ENST00000529540	HS3ST1	O14792	307 aa		12.26	□□□□□ -0.45
NR1H3-231	ENST00000529540	MMP9	P14780	707 aa		12.26	□□□□□ -0.45
NR1H3-231	ENST00000529540	CDX1	P47902	265 aa	Predicted RBP	12.26	□□□□□ -0.45
NR1H3-231	ENST00000529540	FUT6	P51993	359 aa		12.26	□□□□□ -0.45
NR1H3-231	ENST00000529540	OR2B8P	P59922	312 aa		12.26	□□□□□ -0.45
NR1H3-231	ENST00000529540	RND3	P61587	244 aa		12.26	□□□□□ -0.45
NR1H3-231	ENST00000529540	PRDX4	Q13162	271 aa		12.26	□□□□□ -0.45

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