RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 B4E171 279 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 CYB5R3P00387 301 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-220ENST00000529526 MELTFP08582 738 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 MMP9P14780 707 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 TSPAN7P41732 249 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 ZNF841Q6ZN19 808 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 NFAM1Q8NET5 270 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-220ENST00000529526 SRXN1Q9BYN0 137 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 KCNE5Q9UJ90 142 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 ASCC3Q8N3C0 2202 aaKnown RBP7.03□□□□□ -1.28
CTNND1-220ENST00000529526 TRBV23-1A0A0A0MS06 115 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 C17orf51A8MQB3 221 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 SMPD2O60906 423 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 PLAUP00749 431 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 CD1BP29016 333 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 TFPI2P48307 235 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 FGF12P61328 243 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 OVCH2Q7RTZ1 564 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 GBGT1Q8N5D6 347 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 ZNF383Q8NA42 475 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 SNRNP40Q96DI7 357 aaKnown RBP7.03□□□□□ -1.28
CTNND1-220ENST00000529526 PAXXQ9BUH6 204 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 TDRD15B5MCY1 1934 aaKnown RBP7.03□□□□□ -1.28
CTNND1-220ENST00000529526 CTXND1A0A1B0GTU2 59 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 HPRT1P00492 218 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 CDCP2Q5VXM1 449 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 FAM214BQ7L5A3 538 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 MUC15Q8N387 334 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 KCNK17Q96T54 332 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 CGB1A6NKQ9 187 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 DEDDO75618 318 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 HLA-DQB1P01920 261 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 HIST1H1BP16401 226 aaKnown RBP7.03□□□□□ -1.28
CTNND1-220ENST00000529526 FCARP24071 287 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 TGIF1Q15583 401 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 RNFT1Q5M7Z0 435 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 HCP5Q6MZN7 132 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 SLC25A47Q6Q0C1 308 aa7.03□□□□□ -1.28
CTNND1-220ENST00000529526 COL11A1P12107 1806 aaPredicted RBP7.03□□□□□ -1.28
CTNND1-220ENST00000529526 POLR2AP24928 1970 aaKnown RBP7.03□□□□□ -1.28
CTNND1-220ENST00000529526 B4DEV8 164 aa7.02□□□□□ -1.28
CTNND1-220ENST00000529526 ATXN7O15265 892 aaPredicted RBP7.02□□□□□ -1.28
CTNND1-220ENST00000529526 EIF3GO75821 320 aaKnown RBP eCLIP7.02□□□□□ -1.28
CTNND1-220ENST00000529526 GPR6P46095 362 aaPredicted RBP7.02□□□□□ -1.28
CTNND1-220ENST00000529526 SCGB1D4Q6XE38 83 aa7.02□□□□□ -1.28
CTNND1-220ENST00000529526 OR5AU1Q8NGC0 362 aa7.02□□□□□ -1.28
CTNND1-220ENST00000529526 LEAP2Q969E1 77 aa7.02□□□□□ -1.28
CTNND1-220ENST00000529526 RBKSQ9H477 322 aa7.02□□□□□ -1.28
CTNND1-220ENST00000529526 AUP1Q9Y679 476 aa7.02□□□□□ -1.28
CTNND1-220ENST00000529526 TRBV5-5A0A0J9YX44 114 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 FSTP19883 344 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 LOXL3P58215 753 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 TWIST1Q15672 202 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 ZNF645Q8N7E2 425 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 PPP1R3EQ9H7J1 279 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 BET1LQ9NYM9 111 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 PXMP4Q9Y6I8 212 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 MFSD2BA6NFX1 497 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 C5orf52A6NGY3 159 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 STPG2Q8N412 459 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 CYB561D1Q8N8Q1 229 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 TMEM191AQ9H0A3 160 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 IGLV1-36A0A0B4J1U3 117 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 LINC00862A6NCI5 91 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 OR4C46A6NHA9 309 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 CEACAM18A8MTB9 384 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 CA11O75493 328 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 ZNF345Q14585 488 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 METTL1Q9UBP6 276 aaKnown RBP7.02□□□□□ -1.29
CTNND1-220ENST00000529526 IL17BQ9UHF5 180 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 LHFPL6Q9Y693 200 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 RGPD3A6NKT7 1758 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-220ENST00000529526 PCM1Q15154 2024 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 A0A087X0M5 115 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 A0A1B0GX30 115 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 DHRS7CA6NNS2 312 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 SEC11BP0C7V7 166 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 PGA5P0DJD9 388 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 MUC1P15941 1255 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-220ENST00000529526 RSPO4Q2I0M5 234 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-220ENST00000529526 TMEM171Q8WVE6 324 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 PTX4Q96A99 478 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 GHITMQ9H3K2 345 aa7.02□□□□□ -1.29
CTNND1-220ENST00000529526 NUP214P35658 2090 aaPredicted RBP7.02□□□□□ -1.29
CTNND1-220ENST00000529526 HIST1H1EP10412 219 aaKnown RBP7.01□□□□□ -1.29
CTNND1-220ENST00000529526 OR10J1P30954 320 aa7.01□□□□□ -1.29
CTNND1-220ENST00000529526 VN1R17PQ8TDU5 208 aa7.01□□□□□ -1.29
CTNND1-220ENST00000529526 GPX7Q96SL4 187 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-220ENST00000529526 ZFC3H1O60293 1989 aaKnown RBP7.01□□□□□ -1.29
CTNND1-220ENST00000529526 LOC101059948A0A1B0GTJ6 334 aa7.01□□□□□ -1.29
CTNND1-220ENST00000529526 ADAM11O75078 769 aa7.01□□□□□ -1.29
CTNND1-220ENST00000529526 C1QL1O75973 258 aa7.01□□□□□ -1.29
CTNND1-220ENST00000529526 CLDN18P56856 261 aa7.01□□□□□ -1.29
CTNND1-220ENST00000529526 FAM74A3Q4VXF1 159 aa7.01□□□□□ -1.29
CTNND1-220ENST00000529526 H0Y980 276 aa7.01□□□□□ -1.29
CTNND1-220ENST00000529526 COX6A1P12074 109 aa7.01□□□□□ -1.29
CTNND1-220ENST00000529526 CXorf66Q5JRM2 361 aaPredicted RBP7.01□□□□□ -1.29
CTNND1-220ENST00000529526 OR52M1Q8NGK5 317 aa7.01□□□□□ -1.29
CTNND1-220ENST00000529526 SAP25Q8TEE9 199 aa7.01□□□□□ -1.29
CTNND1-220ENST00000529526 WNT2BQ93097 391 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms