RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 SMARCD3Q6STE5 483 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 TEX261Q6UWH6 196 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 C12orf54Q6X4T0 127 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 RASSF6Q6ZTQ3 369 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 SLC36A1Q7Z2H8 476 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 S100A7AQ86SG5 101 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 BAP18Q8IXM2 172 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 TMEM251Q8N6I4 163 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 C11orf72Q8NBR9 251 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 ZNF738Q8NE65 137 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 OR4M2Q8NGB6 313 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 OR4E2Q8NGC2 313 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 OR10K1Q8NGX5 313 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 OR5K1Q8NHB7 308 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 NUBPLQ8TB37 319 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 ORAOV1Q8WV07 137 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 LCN9Q8WX39 176 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 PTX4Q96A99 478 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 EEF1AKMT3Q96AZ1 226 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 CPB2Q96IY4 423 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 ZFP3Q96NJ6 502 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 CAMK2N2Q96S95 79 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 SULT4A1Q9BR01 284 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 CCDC32Q9BV29 185 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 ZNF436Q9C0F3 470 aaPredicted RBP2.33□□□□□ -2.04
CTR9-204ENST00000529355 C6orf50Q9HD87 102 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 SCN3BQ9NY72 215 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 SPANXCQ9NY87 97 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 TAS2R13Q9NYV9 303 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 TMEM216Q9P0N5 145 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 MTFP1Q9UDX5 166 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 ZNF391Q9UJN7 358 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 FARSAQ9Y285 508 aaKnown RBP2.33□□□□□ -2.04
CTR9-204ENST00000529355 ZFP30Q9Y2G7 519 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 MTCH2Q9Y6C9 303 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 U3KQ87 197 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 MYO5CQ9NQX4 1742 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 ANKRD26Q9UPS8 1709 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 LAMB4A4D0S4 1761 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 CCDC88AQ3V6T2 1871 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 PZPP20742 1482 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 SNAPC4Q5SXM2 1469 aa2.33□□□□□ -2.04
CTR9-204ENST00000529355 RPRD2Q5VT52 1461 aaKnown RBP2.33□□□□□ -2.04
CTR9-204ENST00000529355 ABCC3O15438 1527 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 MAGI3Q5TCQ9 1506 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 ARAP3Q8WWN8 1544 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 TRIP11Q15643 1979 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 SYNJ1O43426 1573 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 GCC2Q8IWJ2 1684 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 LTN1O94822 1766 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 TMEM72A0PK05 275 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 TMEM218A2RU14 115 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 OR6C6A6NF89 314 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 SMKR1H3BMG3 65 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 J3QRK9 145 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 K7EMT4 169 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 LGALS9O00182 355 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 GYG2O15488 501 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 RAD51CO43502 376 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 TCF21O43680 179 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 CDC40O60508 579 aaKnown RBP eCLIP2.32□□□□□ -2.04
CTR9-204ENST00000529355 REM1O75628 298 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 ADAP1O75689 374 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 BRI3O95415 125 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 IGF2P01344 180 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 MT-ND4P03905 459 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 GYPCP04921 128 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 NELFEP18615 380 aaKnown RBP2.32□□□□□ -2.04
CTR9-204ENST00000529355 COILP38432 576 aaPredicted RBP2.32□□□□□ -2.04
CTR9-204ENST00000529355 UQCRFS1P47985 274 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 EVX1P49640 407 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 ATP5J2P56134 94 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 SF3A2Q15428 464 aaKnown RBP2.32□□□□□ -2.04
CTR9-204ENST00000529355 AKR1C8PQ5T2L2 129 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 TMEM42Q69YG0 159 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 SCIMPQ6UWF3 145 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 TMPRSS11AQ6ZMR5 421 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 AHSA2Q719I0 299 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 PDZD9Q8IXQ8 264 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 CPNE9Q8IYJ1 553 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 CMTM8Q8IZV2 173 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 SYS1Q8N2H4 156 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 SVBPQ8N300 66 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 OR7G2Q8NG99 324 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 OR9G4Q8NGQ1 327 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 OR2A1Q8NGT9 310 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 OR10X1Q8NGY0 326 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 OR6K3Q8NGY3 331 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 TNFAIP8L1Q8WVP5 186 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 SLC7A6Q92536 515 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 TFGQ92734 400 aaPredicted RBP2.32□□□□□ -2.04
CTR9-204ENST00000529355 NAT6Q93015 286 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 RERGQ96A58 199 aaPredicted RBP2.32□□□□□ -2.04
CTR9-204ENST00000529355 ROPN1LQ96C74 230 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 SEH1LQ96EE3 360 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 GALNT14Q96FL9 552 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 CPNE2Q96FN4 548 aaPredicted RBP2.32□□□□□ -2.04
CTR9-204ENST00000529355 GINS4Q9BRT9 223 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 OR2AG1Q9H205 316 aa2.32□□□□□ -2.04
CTR9-204ENST00000529355 TXNIPQ9H3M7 391 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms