RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 C9orf172C9J069 976 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 IGHMP01871 453 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 MUC1P15941 1255 aaPredicted RBP13.21□□□□□ -0.29
USP35-203ENST00000529308 GAMTQ14353 236 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 C10orf128Q5T292 105 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 Q9N2K0 584 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 RNF7Q9UBF6 113 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 G3V3Q6 166 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 PHOX2AO14813 284 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 OR2A4O95047 310 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 RNF144BQ7Z419 303 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 OR5B3Q8NH48 314 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 BLNKQ8WV28 456 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 AP1S3Q96PC3 154 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 OR2A7Q96R45 310 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 ZNF703Q9H7S9 590 aaPredicted RBP13.21□□□□□ -0.29
USP35-203ENST00000529308 MYOZ1Q9NP98 299 aaPredicted RBP13.21□□□□□ -0.29
USP35-203ENST00000529308 NPIPB13A6NJU9 1138 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 NPIPB4C9JG80 1138 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 CYC1P08574 325 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 PLAURQ03405 335 aa13.21□□□□□ -0.29
USP35-203ENST00000529308 FAM74A7A6NL05 159 aa13.21□□□□□ -0.3
USP35-203ENST00000529308 RPL31P62899 125 aaKnown RBP13.21□□□□□ -0.3
USP35-203ENST00000529308 FAM74A3Q4VXF1 159 aa13.21□□□□□ -0.3
USP35-203ENST00000529308 ASPHD2Q6ICH7 369 aa13.21□□□□□ -0.3
USP35-203ENST00000529308 VWA1Q6PCB0 445 aa13.21□□□□□ -0.3
USP35-203ENST00000529308 ATP5SQ99766 215 aa13.21□□□□□ -0.3
USP35-203ENST00000529308 GINS3Q9BRX5 216 aa13.21□□□□□ -0.3
USP35-203ENST00000529308 TLNRD1Q9H1K6 362 aa13.21□□□□□ -0.3
USP35-203ENST00000529308 PLXND1Q9Y4D7 1925 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 C5orf63A6NC05 138 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 FABP4P15090 132 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 SULT1A1P50225 295 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 KHDC1LQ5JSQ8 128 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 DBX2Q6ZNG2 339 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 OR5D13Q8NGL4 314 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 ZDHHC11Q9H8X9 412 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 LPAR2Q9HBW0 351 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 GLIPR1P48060 266 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 TMEM241Q24JQ0 296 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 VMA21Q3ZAQ7 101 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 ZNF705AQ6ZN79 300 aaPredicted RBP13.2□□□□□ -0.3
USP35-203ENST00000529308 MYPOPQ86VE0 399 aaPredicted RBP13.2□□□□□ -0.3
USP35-203ENST00000529308 SOSTQ9BQB4 213 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 WIPI2Q9Y4P8 454 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 CLDN34H7C241 214 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 CLN5O75503 358 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 GYPAP02724 150 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 ZNF345Q14585 488 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 FAM201AQ5SY85 155 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 NCMAPQ5T1S8 102 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 FAM78BQ5VT40 261 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 PUSL1Q8N0Z8 303 aaKnown RBP13.2□□□□□ -0.3
USP35-203ENST00000529308 OR4S2Q8NH73 311 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 FGFBP3Q8TAT2 258 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 TMEM222Q9H0R3 208 aa13.2□□□□□ -0.3
USP35-203ENST00000529308 PINLYPA6NC86 204 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 PROB1E7EW31 1015 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 CD74P04233 296 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 CD3EP07766 207 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 RPS2P15880 293 aaKnown RBP13.19□□□□□ -0.3
USP35-203ENST00000529308 COMMD1Q8N668 190 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 ZNF441Q8N8Z8 693 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 PIPOXQ9P0Z9 390 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 LRRK1Q38SD2 2015 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 ZNF818PQ6ZRF7 136 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 RHOVQ96L33 236 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 TRAV38-1A0A0B4J264 116 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 CELA3BP08861 270 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 ZNRF1Q8ND25 227 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 OR10D4PQ8NGN7 298 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 MOB3AQ96BX8 217 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 TP53RKQ96S44 253 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 TMEM147Q9BVK8 224 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 PLXNA3P51805 1871 aa13.19□□□□□ -0.3
USP35-203ENST00000529308 ACP1P24666 158 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 H3F3AP84243 136 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 SH3BGRL3Q9H299 93 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 GAL3ST2Q9H3Q3 398 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 CLCF1Q9UBD9 225 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 PRR19A6NJB7 356 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 HSBP1L1C9JCN9 74 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 SYNGR3O43761 229 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 PAGE4O60829 102 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 PGLYRP1O75594 196 aaPredicted RBP13.18□□□□□ -0.3
USP35-203ENST00000529308 SSTR5P35346 364 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 RAB7AP51149 207 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 C17orf82Q86X59 251 aaPredicted RBP13.18□□□□□ -0.3
USP35-203ENST00000529308 STPG2Q8N412 459 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 FGFRL1Q8N441 504 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 TMEM54Q969K7 222 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 TMEM56Q96MV1 263 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 TLN1Q9Y490 2541 aaKnown RBP13.18□□□□□ -0.3
USP35-203ENST00000529308 CRYM-AS1A6NIL9 109 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 PRR33A8MZF0 331 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 DEDDO75618 318 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 CRYBA1P05813 215 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 TNXAQ16473 311 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 SPNS3Q6ZMD2 512 aa13.18□□□□□ -0.3
USP35-203ENST00000529308 SLC16A13Q7RTY0 426 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms