RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 ZP3P21754 424 aa14.36□□□□□ -0.11
SSRP1-204ENST00000529002 TMEM267Q0VDI3 215 aaPredicted RBP14.36□□□□□ -0.11
SSRP1-204ENST00000529002 DYRK1AQ13627 763 aa14.36□□□□□ -0.11
SSRP1-204ENST00000529002 PLGLAQ15195 96 aa14.36□□□□□ -0.11
SSRP1-204ENST00000529002 NHLRC3Q5JS37 347 aa14.36□□□□□ -0.11
SSRP1-204ENST00000529002 PYHIN1Q6K0P9 492 aa14.36□□□□□ -0.11
SSRP1-204ENST00000529002 GLDNQ6ZMI3 551 aaPredicted RBP14.36□□□□□ -0.11
SSRP1-204ENST00000529002 CIB1Q99828 191 aa14.36□□□□□ -0.11
SSRP1-204ENST00000529002 METTL9Q9H1A3 318 aa14.36□□□□□ -0.11
SSRP1-204ENST00000529002 RIBC2Q9H4K1 309 aa14.36□□□□□ -0.11
SSRP1-204ENST00000529002 ZNF355PQ9NSJ1 428 aa14.36□□□□□ -0.11
SSRP1-204ENST00000529002 SAA2-SAA4A0A096LPE2 208 aa14.35□□□□□ -0.11
SSRP1-204ENST00000529002 ARPC1BO15143 372 aaKnown RBP14.35□□□□□ -0.11
SSRP1-204ENST00000529002 MAGEB3O15480 346 aa14.35□□□□□ -0.11
SSRP1-204ENST00000529002 TRBV12-3P01733 135 aa14.35□□□□□ -0.11
SSRP1-204ENST00000529002 SAA2P0DJI9 122 aaPredicted RBP14.35□□□□□ -0.11
SSRP1-204ENST00000529002 TMED1Q13445 227 aa14.35□□□□□ -0.11
SSRP1-204ENST00000529002 FLOT2Q14254 428 aa14.35□□□□□ -0.11
SSRP1-204ENST00000529002 STEAP3Q658P3 488 aa14.35□□□□□ -0.11
SSRP1-204ENST00000529002 LCN12Q6JVE5 192 aa14.35□□□□□ -0.11
SSRP1-204ENST00000529002 ZNF833PQ6ZTB9 187 aa14.35□□□□□ -0.11
SSRP1-204ENST00000529002 STX19Q8N4C7 294 aa14.35□□□□□ -0.11
SSRP1-204ENST00000529002 OR8J1Q8NGP2 316 aa14.35□□□□□ -0.11
SSRP1-204ENST00000529002 RGP1Q92546 391 aaPredicted RBP14.35□□□□□ -0.11
SSRP1-204ENST00000529002 ORAI1Q96D31 301 aa14.35□□□□□ -0.11
SSRP1-204ENST00000529002 TAF9BQ9HBM6 251 aa14.35□□□□□ -0.11
SSRP1-204ENST00000529002 ETAA1Q9NY74 926 aa14.35□□□□□ -0.11
SSRP1-204ENST00000529002 FAM53CQ9NYF3 392 aa14.35□□□□□ -0.11
SSRP1-204ENST00000529002 CXorf65A6NEN9 183 aa14.34□□□□□ -0.11
SSRP1-204ENST00000529002 G3V2T6 193 aa14.34□□□□□ -0.11
SSRP1-204ENST00000529002 EWSR1Q01844 656 aaKnown RBP eCLIP14.34□□□□□ -0.11
SSRP1-204ENST00000529002 SLC22A6Q4U2R8 563 aa14.34□□□□□ -0.11
SSRP1-204ENST00000529002 AKIRIN2Q53H80 203 aa14.34□□□□□ -0.11
SSRP1-204ENST00000529002 C6orf183Q5T699 404 aa14.34□□□□□ -0.11
SSRP1-204ENST00000529002 LHFPL3Q86UP9 236 aa14.34□□□□□ -0.11
SSRP1-204ENST00000529002 Q8N402 240 aa14.34□□□□□ -0.11
SSRP1-204ENST00000529002 OR5T1Q8NG75 326 aa14.34□□□□□ -0.11
SSRP1-204ENST00000529002 RFKQ969G6 155 aa14.34□□□□□ -0.11
SSRP1-204ENST00000529002 MRPS24Q96EL2 167 aaKnown RBP14.34□□□□□ -0.11
SSRP1-204ENST00000529002 NEURL2Q9BR09 285 aa14.34□□□□□ -0.11
SSRP1-204ENST00000529002 IL36GQ9NZH8 169 aa14.34□□□□□ -0.11
SSRP1-204ENST00000529002 AASSQ9UDR5 926 aa14.34□□□□□ -0.11
SSRP1-204ENST00000529002 C13orf42A0A1B0GVH6 325 aa14.33□□□□□ -0.12
SSRP1-204ENST00000529002 CALB2P22676 271 aa14.33□□□□□ -0.12
SSRP1-204ENST00000529002 GYS2P54840 703 aa14.33□□□□□ -0.12
SSRP1-204ENST00000529002 MPV17LQ2QL34 196 aa14.33□□□□□ -0.12
SSRP1-204ENST00000529002 OR5AK2Q8NH90 309 aa14.33□□□□□ -0.12
SSRP1-204ENST00000529002 TMEM106AQ96A25 262 aa14.33□□□□□ -0.12
SSRP1-204ENST00000529002 CPNE2Q96FN4 548 aaPredicted RBP14.33□□□□□ -0.12
SSRP1-204ENST00000529002 SLA2Q9H6Q3 261 aa14.33□□□□□ -0.12
SSRP1-204ENST00000529002 SRD5A3Q9H8P0 318 aa14.33□□□□□ -0.12
SSRP1-204ENST00000529002 RNF150Q9ULK6 438 aa14.33□□□□□ -0.12
SSRP1-204ENST00000529002 TPPPO94811 219 aa14.32□□□□□ -0.12
SSRP1-204ENST00000529002 CA2P00918 260 aa14.32□□□□□ -0.12
SSRP1-204ENST00000529002 HOXB6P17509 224 aaKnown RBP14.32□□□□□ -0.12
SSRP1-204ENST00000529002 MECP2P51608 486 aaKnown RBP14.32□□□□□ -0.12
SSRP1-204ENST00000529002 RPL39P5Q59GN2 51 aa14.32□□□□□ -0.12
SSRP1-204ENST00000529002 LINC00596Q86U02 117 aa14.32□□□□□ -0.12
SSRP1-204ENST00000529002 ALG8Q9BVK2 526 aa14.32□□□□□ -0.12
SSRP1-204ENST00000529002 JAM3Q9BX67 310 aa14.32□□□□□ -0.12
SSRP1-204ENST00000529002 PARP12Q9H0J9 701 aaKnown RBP14.32□□□□□ -0.12
SSRP1-204ENST00000529002 MED4Q9NPJ6 270 aa14.32□□□□□ -0.12
SSRP1-204ENST00000529002 UBE2QL1A1L167 161 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 ZNF785A8K8V0 405 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 MCRIP1C9JLW8 97 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 CNIH1O95406 144 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 FADS2O95864 444 aaKnown RBP14.31□□□□□ -0.12
SSRP1-204ENST00000529002 TFAP2AP05549 437 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 RPSAP08865 295 aaKnown RBP14.31□□□□□ -0.12
SSRP1-204ENST00000529002 CT45A6P0DMU7 189 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 CT45A5P0DMU8 189 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 CT45A7P0DMV0 189 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 ZNF93P35789 620 aaPredicted RBP14.31□□□□□ -0.12
SSRP1-204ENST00000529002 ALDH3A2P51648 485 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 TMEM30BQ3MIR4 351 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 DDI2Q5TDH0 399 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 RAB12Q6IQ22 244 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 AMIGO2Q86SJ2 522 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 GAPTQ8N292 157 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 ACBD7Q8N6N7 88 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 GRPEL2Q8TAA5 225 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 GABARAPL1Q9H0R8 117 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 IFI27L2Q9H2X8 130 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 RCC2Q9P258 522 aaKnown RBP14.31□□□□□ -0.12
SSRP1-204ENST00000529002 METTL1Q9UBP6 276 aaKnown RBP14.31□□□□□ -0.12
SSRP1-204ENST00000529002 SELENOKQ9Y6D0 94 aa14.31□□□□□ -0.12
SSRP1-204ENST00000529002 TMEM212A6NML5 194 aa14.3□□□□□ -0.12
SSRP1-204ENST00000529002 ST8SIA5O15466 376 aa14.3□□□□□ -0.12
SSRP1-204ENST00000529002 MAS1P04201 325 aa14.3□□□□□ -0.12
SSRP1-204ENST00000529002 CD40LGP29965 261 aa14.3□□□□□ -0.12
SSRP1-204ENST00000529002 GTF2A1P52655 376 aaPredicted RBP14.3□□□□□ -0.12
SSRP1-204ENST00000529002 GNGT1P63211 74 aa14.3□□□□□ -0.12
SSRP1-204ENST00000529002 CD300EQ496F6 205 aaPredicted RBP14.3□□□□□ -0.12
SSRP1-204ENST00000529002 POC5Q8NA72 575 aa14.3□□□□□ -0.12
SSRP1-204ENST00000529002 S100A13Q99584 98 aa14.3□□□□□ -0.12
SSRP1-204ENST00000529002 RAB9BQ9NP90 201 aa14.3□□□□□ -0.12
SSRP1-204ENST00000529002 SLC23A1Q9UHI7 598 aa14.3□□□□□ -0.12
SSRP1-204ENST00000529002 PEX16Q9Y5Y5 336 aa14.3□□□□□ -0.12
SSRP1-204ENST00000529002 OR11H12B2RN74 326 aa14.29□□□□□ -0.12
SSRP1-204ENST00000529002 GSTP1P09211 210 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms