RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 OR2AK2Q8NG84 335 aa12.31□□□□□ -0.44
CAPN1-213ENST00000527897 PDCD5O14737 125 aa12.3□□□□□ -0.44
CAPN1-213ENST00000527897 DENRO43583 198 aaKnown RBP12.3□□□□□ -0.44
CAPN1-213ENST00000527897 PF4P02776 101 aa12.3□□□□□ -0.44
CAPN1-213ENST00000527897 OR3A3P47888 321 aa12.3□□□□□ -0.44
CAPN1-213ENST00000527897 PSMD7P51665 324 aa12.3□□□□□ -0.44
CAPN1-213ENST00000527897 ZNF137PP52743 207 aa12.3□□□□□ -0.44
CAPN1-213ENST00000527897 EBI3Q14213 229 aa12.3□□□□□ -0.44
CAPN1-213ENST00000527897 STEAP3Q658P3 488 aa12.3□□□□□ -0.44
CAPN1-213ENST00000527897 C22orf42Q6IC83 251 aa12.3□□□□□ -0.44
CAPN1-213ENST00000527897 FOXRED2Q8IWF2 684 aa12.3□□□□□ -0.44
CAPN1-213ENST00000527897 ARHGAP5-AS1Q96IT6 56 aa12.3□□□□□ -0.44
CAPN1-213ENST00000527897 RASL11BQ9BPW5 248 aa12.3□□□□□ -0.44
CAPN1-213ENST00000527897 NDUFB11Q9NX14 153 aa12.3□□□□□ -0.44
CAPN1-213ENST00000527897 STEAP1Q9UHE8 339 aa12.3□□□□□ -0.44
CAPN1-213ENST00000527897 LRRC42Q9Y546 428 aa12.3□□□□□ -0.44
CAPN1-213ENST00000527897 TMEM272A0A1B0GTI8 110 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 SMIM30A4D0T7 59 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 LINC01548A6NM66 108 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 ST8SIA5O15466 376 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 LANCL1O43813 399 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 YPEL1O60688 119 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 NAPSAO96009 420 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 CD33P20138 364 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 PLA2G7Q13093 441 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 LSAMPQ13449 338 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 OXLD1Q5BKU9 147 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 Q6ZPA2 131 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 MOB1BQ7L9L4 216 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 Q8N6K4 173 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 Q8N9W7 124 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 CHPT1Q8WUD6 406 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 YPEL2Q96QA6 119 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 CMSS1Q9BQ75 279 aaKnown RBP12.29□□□□□ -0.44
CAPN1-213ENST00000527897 PECRQ9BY49 303 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 MRPL20Q9BYC9 149 aaKnown RBP12.29□□□□□ -0.44
CAPN1-213ENST00000527897 SLC23A1Q9UHI7 598 aa12.29□□□□□ -0.44
CAPN1-213ENST00000527897 SHISA3A0PJX4 238 aa12.28□□□□□ -0.44
CAPN1-213ENST00000527897 HSPA12AO43301 675 aa12.28□□□□□ -0.44
CAPN1-213ENST00000527897 SLC2A2P11168 524 aaPredicted RBP12.28□□□□□ -0.44
CAPN1-213ENST00000527897 RAB3BP20337 219 aa12.28□□□□□ -0.44
CAPN1-213ENST00000527897 RANBP1P43487 201 aa12.28□□□□□ -0.44
CAPN1-213ENST00000527897 F2RL1P55085 397 aa12.28□□□□□ -0.44
CAPN1-213ENST00000527897 SLC35B1P78383 322 aa12.28□□□□□ -0.44
CAPN1-213ENST00000527897 HLA-DRB3P79483 266 aa12.28□□□□□ -0.44
CAPN1-213ENST00000527897 MRPS15P82914 257 aaKnown RBP12.28□□□□□ -0.44
CAPN1-213ENST00000527897 SPARTQ8N0X7 666 aa12.28□□□□□ -0.44
CAPN1-213ENST00000527897 FAM89BQ8N5H3 189 aa12.28□□□□□ -0.44
CAPN1-213ENST00000527897 OR56B1Q8NGI3 324 aa12.28□□□□□ -0.44
CAPN1-213ENST00000527897 S1PR3Q99500 378 aa12.28□□□□□ -0.44
CAPN1-213ENST00000527897 ABCG5Q9H222 651 aa12.28□□□□□ -0.44
CAPN1-213ENST00000527897 RIMS4Q9H426 269 aaPredicted RBP12.28□□□□□ -0.44
CAPN1-213ENST00000527897 C12orf4Q9NQ89 552 aa12.28□□□□□ -0.44
CAPN1-213ENST00000527897 LIN7CQ9NUP9 197 aaKnown RBP12.28□□□□□ -0.44
CAPN1-213ENST00000527897 RAB22AQ9UL26 194 aa12.28□□□□□ -0.44
CAPN1-213ENST00000527897 A0A075B6Q4 140 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 SAA2-SAA4A0A096LPE2 208 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 A0A0B4J203 849 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 TRAV1-2A0A0B4J238 106 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 TRDV1A0A1B0GX56 115 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 MRPS14O60783 128 aaKnown RBP12.27□□□□□ -0.45
CAPN1-213ENST00000527897 IGHG2P01859 326 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 PRB2P02812 416 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-213ENST00000527897 SAA2P0DJI9 122 aaPredicted RBP12.27□□□□□ -0.45
CAPN1-213ENST00000527897 GPR12P47775 334 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 TMEM50BP56557 158 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 MMDQ15546 238 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 PLAC9Q5JTB6 97 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 UBE2UQ5VVX9 321 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 ZNF880Q6PDB4 577 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 ODF3L1Q8IXM7 274 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 STPG2Q8N412 459 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 PARP12Q9H0J9 701 aaKnown RBP12.27□□□□□ -0.45
CAPN1-213ENST00000527897 PLSCR3Q9NRY6 295 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 OR1A1Q9P1Q5 309 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 HSF4Q9ULV5 492 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 NOTCH3Q9UM47 2321 aa12.27□□□□□ -0.45
CAPN1-213ENST00000527897 TGP01266 2768 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 IFITM5A6NNB3 132 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 FOXI3A8MTJ6 420 aaPredicted RBP12.26□□□□□ -0.45
CAPN1-213ENST00000527897 NUDT19A8MXV4 375 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 AP4M1O00189 453 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 SCTP09683 121 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 CD3GP09693 182 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 CEACAM6P40199 344 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 BEAN1Q3B7T3 259 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 SAMD5Q5TGI4 173 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 CD200R1LQ6Q8B3 271 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 OR8H1Q8NGG4 311 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 RAB3CQ96E17 227 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 ABHD14BQ96IU4 210 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 NABP2Q9BQ15 211 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 HSPB9Q9BQS6 159 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 ZNF251Q9BRH9 671 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 IFI27L2Q9H2X8 130 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 MGAT4AQ9UM21 535 aa12.26□□□□□ -0.45
CAPN1-213ENST00000527897 LDLRAD4O15165 306 aa12.25□□□□□ -0.45
CAPN1-213ENST00000527897 IGLL1P15814 213 aa12.25□□□□□ -0.45
CAPN1-213ENST00000527897 ZBTB25P24278 435 aa12.25□□□□□ -0.45
CAPN1-213ENST00000527897 CNTFRP26992 372 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms