RNA–Protein interactions for RNA: ENST00000527619.5

SOX6-208, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-208ENST00000527619 ZNF665Q9H7R5 613 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 ELL3Q9HB65 397 aaPredicted RBP6.44□□□□□ -1.38
SOX6-208ENST00000527619 FGF21Q9NSA1 209 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 TMEM106BQ9NUM4 274 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 SLC45A2Q9UMX9 530 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 PAM16Q9Y3D7 125 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 TRAV36DV7A0A075B6V5 113 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 F8WDY8 70 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 S1PR2O95136 353 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 IGHMP01871 453 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 CT45A8P0DMV1 189 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 CT45A9P0DMV2 189 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 SRP14P37108 136 aaKnown RBP6.44□□□□□ -1.38
SOX6-208ENST00000527619 GPR6P46095 362 aaPredicted RBP6.44□□□□□ -1.38
SOX6-208ENST00000527619 GABRA2P47869 451 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 HNRNPA3P51991 378 aaKnown RBP6.44□□□□□ -1.38
SOX6-208ENST00000527619 CEACAM21Q3KPI0 293 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 CT45A2Q5DJT8 189 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 C9orf50Q5SZB4 431 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 RAET1LQ5VY80 246 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 CBLN3Q6UW01 205 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 CPEB2Q7Z5Q1 589 aaKnown RBP6.44□□□□□ -1.38
SOX6-208ENST00000527619 ZNF295-AS1Q8N0V1 137 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 OR2Y1Q8NGV0 311 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 OR2T10Q8NGZ9 312 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 IL22RA2Q969J5 263 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 SMIM7Q9BQ49 75 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 OR51I2Q9H344 312 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 THAP10Q9P2Z0 257 aaPredicted RBP6.44□□□□□ -1.38
SOX6-208ENST00000527619 MMP17Q9ULZ9 603 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 FREM3P0C091 2139 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 CPAMD8Q8IZJ3 1885 aa6.44□□□□□ -1.38
SOX6-208ENST00000527619 CEBPZOSA8MTT3 80 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 RAB29O14966 203 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 SSSCA1O60232 199 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 HAND1O96004 215 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 IFNA1P01562 189 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 OTX2P32243 289 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 NKX2-1P43699 371 aaPredicted RBP6.43□□□□□ -1.38
SOX6-208ENST00000527619 PDGFRLQ15198 375 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 CLEC12BQ2HXU8 276 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 TSPO2Q5TGU0 170 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 TMEM256Q8N2U0 113 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 C5orf17Q8NAS9 161 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 SARAFQ96BY9 339 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 ZNF524Q96C55 264 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 ATP5SQ99766 215 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 ASCL2Q99929 193 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 NKX2-4Q9H2Z4 354 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 PLK3Q9H4B4 646 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 ZNF581Q9P0T4 197 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 UQCR10Q9UDW1 63 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 ANXA10Q9UJ72 324 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 ZNF391Q9UJN7 358 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 SLC17A4Q9Y2C5 497 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 HEBP2Q9Y5Z4 205 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 B3GALT1Q9Y5Z6 326 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 B4DGG1 531 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 RPL23P62829 140 aaKnown RBP6.43□□□□□ -1.38
SOX6-208ENST00000527619 GABRA6Q16445 453 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 PHLDA2Q53GA4 152 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 CST9LP1Q5W188 147 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 CRIPAKQ8N1N5 446 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 OR51E1Q8TCB6 317 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 MBD3L1Q8WWY6 194 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 C1orf159Q96HA4 380 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 GABRG3Q99928 467 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 LIME1Q9H400 295 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 ZNF160Q9HCG1 818 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 TMEM9BQ9NQ34 198 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 GPR27Q9NS67 375 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 NECAP2Q9NVZ3 263 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 MCTS1Q9ULC4 181 aaKnown RBP6.43□□□□□ -1.38
SOX6-208ENST00000527619 PHF1O43189 567 aaPredicted RBP6.43□□□□□ -1.38
SOX6-208ENST00000527619 LILRA1O75019 489 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 CST7O76096 145 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 KBTBD11O94819 623 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 GLI4P10075 376 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 HINT1P49773 126 aaPredicted RBP6.43□□□□□ -1.38
SOX6-208ENST00000527619 TPPP2P59282 170 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 SRPXP78539 464 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 ELAVL3Q14576 367 aaKnown RBP6.43□□□□□ -1.38
SOX6-208ENST00000527619 GCSAMLQ5JQS6 135 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 KCNIP4Q6PIL6 250 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 LCN15Q6UWW0 184 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 TMEM217Q8N7C4 229 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 CMTM2Q8TAZ6 248 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 RERGQ96A58 199 aaPredicted RBP6.43□□□□□ -1.38
SOX6-208ENST00000527619 SLAMF6Q96DU3 332 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 NEIL1Q96FI4 390 aaPredicted RBP6.43□□□□□ -1.38
SOX6-208ENST00000527619 ABHD14BQ96IU4 210 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 RASL10BQ96S79 203 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 NXT1Q9UKK6 140 aaKnown RBP6.43□□□□□ -1.38
SOX6-208ENST00000527619 HCFC2Q9Y5Z7 792 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 WNT6Q9Y6F9 365 aa6.43□□□□□ -1.38
SOX6-208ENST00000527619 ALPK2Q86TB3 2170 aa6.42□□□□□ -1.38
SOX6-208ENST00000527619 SPAARA0A1B0GVQ0 90 aa6.42□□□□□ -1.38
SOX6-208ENST00000527619 PRR19A6NJB7 356 aa6.42□□□□□ -1.38
SOX6-208ENST00000527619 LRRC3CA6NJW4 275 aa6.42□□□□□ -1.38
SOX6-208ENST00000527619 H0Y980 276 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms