RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, human

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-205	ENST00000527497	TSTD3	H0UI37	97 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	EEF1E1	O43324	174 aa	Known RBP	4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	STK16	O75716	305 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	IGLV1-47	P01700	117 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	OR12D1	P0DN82	309 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	S100A1	P23297	94 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	CRABP1	P29762	137 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	BTN3A2	P78410	334 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	PRDX4	Q13162	271 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	JOSD1	Q15040	202 aa	Predicted RBP	4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	CDK10	Q15131	360 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	CCDC153	Q494R4	210 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	ABCA11P	Q4W5N1	156 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	MORN3	Q6PF18	240 aa	Predicted RBP	4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	DPPA2	Q7Z7J5	298 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	OR11H1	Q8NG94	326 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	OR8A1	Q8NGG7	326 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	OR11H2	Q8NH07	326 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	GALM	Q96C23	342 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	ANKRD36BP1	Q96IX9	119 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	DERL3	Q96Q80	235 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	THTPA	Q9BU02	230 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	MED18	Q9BUE0	208 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	PARVB	Q9HBI1	364 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	ATRN	O75882	1429 aa		4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	MAGI1	Q96QZ7	1491 aa	Predicted RBP	4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	DNMT1	P26358	1616 aa	Known RBP	4.1	□□□□□ -1.75
NXF1-205	ENST00000527497	TET2	Q6N021	2002 aa	Predicted RBP	4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	SCN2A	Q99250	2005 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	IGKV1-6	A0A0C4DH72	117 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497		A0A1W2PP18	115 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497		A8MWL6	223 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	RGS5	O15539	181 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	IGKV1-39	P01597	117 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	IGKV1D-39	P04432	117 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	OR56A5	P0C7T3	313 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	SEC11B	P0C7V7	166 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	PSMB3	P49720	205 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	TAS2R41	P59536	307 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	PSG4	Q00888	419 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	FLI1	Q01543	452 aa	Predicted RBP	4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	TSN	Q15631	228 aa	Known RBP	4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	MPPED2	Q15777	294 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	TMEM241	Q24JQ0	296 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	ARHGAP11B	Q3KRB8	267 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	ALKAL1	Q6UXT8	129 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	NTM-AS1	Q6ZSK4	140 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	ATP5L2	Q7Z4Y8	100 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	UBL4B	Q8N7F7	174 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	TMEM75	Q8N9X5	138 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	APOBEC3D	Q96AK3	386 aa	Predicted RBP	4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	BORCS7	Q96B45	105 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	AIF1L	Q9BQI0	150 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	WFDC1	Q9HC57	220 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	TNFRSF19	Q9NS68	423 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	KIF15	Q9NS87	1388 aa		4.09	□□□□□ -1.75
NXF1-205	ENST00000527497	PPRC1	Q5VV67	1664 aa	Known RBP	4.09	□□□□□ -1.76
NXF1-205	ENST00000527497	PIKFYVE	Q9Y2I7	2098 aa		4.09	□□□□□ -1.76
NXF1-205	ENST00000527497	IGHV1-45	A0A0A0MS14	117 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	GMNC	A6NCL1	334 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	OR6C6	A6NF89	314 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	PPP5D1	E7EU14	171 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497		H3BSA7	217 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	BHLHE40	O14503	412 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	SYNM	O15061	1565 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	IFNA1	P01562	189 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	IGLV3-25	P01717	112 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	HLA-DQA1	P01909	254 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	TTR	P02766	147 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	FAM228B	P0C875	321 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	OR13C7	P0DN81	318 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	SCGB1A1	P11684	91 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	HSPA9	P38646	679 aa	Known RBP	4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	NUDT2	P50583	147 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	CTBP2	P56545	445 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	ABCC8	Q09428	1581 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	FAM201A	Q5SY85	155 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	MARCH3	Q86UD3	253 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	DEFB125	Q8N687	156 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	OR52N1	Q8NH53	320 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	OR5W2	Q8NH69	310 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	CPNE2	Q96FN4	548 aa	Predicted RBP	4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	NARS2	Q96I59	477 aa	Known RBP	4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	ADCY10	Q96PN6	1610 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	GTSF1L	Q9H1H1	148 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	BIN3	Q9NQY0	253 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	PLSCR3	Q9NRY6	295 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	ZNRD1	Q9P1U0	126 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	DIP2B	Q9P265	1576 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	ENOPH1	Q9UHY7	261 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	GPATCH8	Q9UKJ3	1502 aa	Known RBP	4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	FAM32A	Q9Y421	112 aa	Known RBP	4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	OR51B4	Q9Y5P0	310 aa		4.08	□□□□□ -1.76
NXF1-205	ENST00000527497	GRIN2B	Q13224	1484 aa		4.07	□□□□□ -1.76
NXF1-205	ENST00000527497	NUP160	Q12769	1436 aa		4.07	□□□□□ -1.76
NXF1-205	ENST00000527497	TMEM223	A0PJW6	202 aa		4.07	□□□□□ -1.76
NXF1-205	ENST00000527497	OR4C46	A6NHA9	309 aa		4.07	□□□□□ -1.76
NXF1-205	ENST00000527497		M0QZK8	103 aa		4.07	□□□□□ -1.76
NXF1-205	ENST00000527497	PHOX2A	O14813	284 aa		4.07	□□□□□ -1.76
NXF1-205	ENST00000527497	POP7	O75817	140 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms