RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 FBXO9Q9UK97 447 aaPredicted RBP13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 IGKV1D-17A0A075B6S4 117 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 E5RGE8 158 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 MED6O75586 246 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 SRPXP78539 464 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 LINC00518Q8N0U6 118 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 KDF1Q8NAX2 398 aaPredicted RBP13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 UBAC2Q8NBM4 344 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 GLYATL2Q8WU03 294 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 PLPPR2Q96GM1 343 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 COQ2Q96H96 371 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 NSG2Q9Y328 171 aa13.58□□□□□ -0.24
SNRNP35-204ENST00000527158 NCOR2Q9Y618 2525 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 SHANK1Q9Y566 2161 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 IGHV3OR15-7A0A075B7D8 119 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 NKX2-6A6NCS4 301 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 RNASEK-C17orf49H0YIS7 233 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 SIGLEC5O15389 551 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 IRF2P14316 349 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 TNFRSF1AP19438 455 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 PAX6P26367 422 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 HOXA1P49639 335 aaPredicted RBP13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 GPR157Q5UAW9 335 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 GGNBP1Q5YKI7 109 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 RPL7L1Q6DKI1 246 aaKnown RBP13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 BTNL8Q6UX41 500 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 OR10V1Q8NGI7 309 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 MSI2Q96DH6 328 aaKnown RBP13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 SNX22Q96L94 193 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 HRH4Q9H3N8 390 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 FAM212BQ9NTI7 297 aaPredicted RBP13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 UBE2J1Q9Y385 318 aaPredicted RBP13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 RBM7Q9Y580 266 aaKnown RBP13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 SPTA1P02549 2419 aa13.57□□□□□ -0.24
SNRNP35-204ENST00000527158 BORCS7-ASMTA0A0B4J1R7 106 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 C17orf100A8MU93 164 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 FBXO24O75426 580 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 CD3EP07766 207 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 ADH4P08319 380 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 IL2RGP31785 369 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 CEACAM6P40199 344 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 AKR1C2P52895 323 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 DVL1P1P54792 670 aaPredicted RBP13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 PAX5Q02548 391 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 AKR1C1Q04828 323 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 SWI5Q1ZZU3 235 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 Q8TCH9 128 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 CA5BP1Q8WTZ4 195 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 TP53RKQ96S44 253 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 PPP1R3CQ9UQK1 317 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 ZNF737O75373 536 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 CD5P06127 495 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 GLIPR1P48060 266 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 ADORA2A-AS1P86434 159 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 TRAT1Q6PIZ9 186 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 LYPD6BQ8NI32 183 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 UBALD1Q8TB05 177 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 C18orf12Q96KH6 178 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 LURAP1Q96LR2 239 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 TMEM222Q9H0R3 208 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 BIN3Q9NQY0 253 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 KPTNQ9Y664 436 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 POLEQ07864 2286 aa13.56□□□□□ -0.24
SNRNP35-204ENST00000527158 SHISA9B4DS77 424 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 C12orf77C9JDV5 145 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 MGST3O14880 152 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 CD55P08174 381 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 MUC1P15941 1255 aaPredicted RBP13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 RAB5CP51148 216 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 CCL8P80075 99 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 TLE1Q04724 770 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 TESK1Q15569 626 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 LINC01560Q8TB33 94 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 MRGPRDQ8TDS7 321 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 PCNX1Q96RV3 2341 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 EGLN1Q9GZT9 426 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 ARV1Q9H2C2 271 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 PGLYRP1O75594 196 aaPredicted RBP13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 HBZP02008 142 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 SEC11BP0C7V7 166 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 EDDM3AQ14507 147 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 MEX3BQ6ZN04 569 aaKnown RBP13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 LYZL2Q7Z4W2 148 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 OR1L1Q8NH94 360 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 FAM222BQ8WU58 562 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 NINJ1Q92982 152 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 KCNJ16Q9NPI9 418 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 FBXL17Q9UF56 701 aa13.55□□□□□ -0.24
SNRNP35-204ENST00000527158 CHD3Q12873 2000 aaKnown RBP13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 LRRC30A6NM36 301 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 GPR137BO60478 399 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 CYB5R3P00387 301 aaPredicted RBP13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 CD80P33681 288 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 LPAR6P43657 344 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 RAB13P51153 203 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 SRSF3P84103 164 aaKnown RBP13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 TMEM88Q6PEY1 159 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 ZNF695Q8IW36 515 aa13.54□□□□□ -0.24
SNRNP35-204ENST00000527158 DMRTC2Q8IXT2 367 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms