RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 DYNLT3P51808 116 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 CT45A1Q5HYN5 189 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 TPTE2P1Q5T6R2 138 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 CCDC144NLQ6NUI1 221 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 C5orf24Q7Z6I8 188 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 CT45A3Q8NHU0 189 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 GPX8Q8TED1 209 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 EDARADDQ8WWZ3 215 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 MAFIPQ8WZ33 124 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 ABHD14AQ9BUJ0 271 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 DPAGT1Q9H3H5 408 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 GHITMQ9H3K2 345 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 SLC23A1Q9UHI7 598 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 ANXA10Q9UJ72 324 aa16.79■□□□□ 0.28
CD44-222ENST00000526025 MRPS7Q9Y2R9 242 aaKnown RBP16.79■□□□□ 0.28
CD44-222ENST00000526025 IGKV1D-8A0A087WSZ0 117 aa16.78■□□□□ 0.28
CD44-222ENST00000526025 HSPA12AO43301 675 aa16.78■□□□□ 0.28
CD44-222ENST00000526025 NAT1P18440 290 aa16.78■□□□□ 0.28
CD44-222ENST00000526025 IER3P46695 156 aa16.78■□□□□ 0.28
CD44-222ENST00000526025 RAB7AP51149 207 aa16.78■□□□□ 0.28
CD44-222ENST00000526025 ARHGDIBP52566 201 aa16.78■□□□□ 0.28
CD44-222ENST00000526025 ZNF134P52741 427 aa16.78■□□□□ 0.28
CD44-222ENST00000526025 MRPS10P82664 201 aaKnown RBP16.78■□□□□ 0.28
CD44-222ENST00000526025 BAMBIQ13145 260 aa16.78■□□□□ 0.28
CD44-222ENST00000526025 LRRC75BQ2VPJ9 315 aa16.78■□□□□ 0.28
CD44-222ENST00000526025 PRIMA1Q86XR5 153 aa16.78■□□□□ 0.28
CD44-222ENST00000526025 BEST4Q8NFU0 473 aa16.78■□□□□ 0.28
CD44-222ENST00000526025 OR2AK2Q8NG84 335 aa16.78■□□□□ 0.28
CD44-222ENST00000526025 OR5R1Q8NH85 324 aa16.78■□□□□ 0.28
CD44-222ENST00000526025 ZFAND2BQ8WV99 257 aa16.78■□□□□ 0.28
CD44-222ENST00000526025 IGHV3-7P01780 117 aa16.77■□□□□ 0.28
CD44-222ENST00000526025 PTHLHP12272 177 aa16.77■□□□□ 0.28
CD44-222ENST00000526025 SSX2Q16385 188 aa16.77■□□□□ 0.28
CD44-222ENST00000526025 IGSF11Q5DX21 431 aa16.77■□□□□ 0.28
CD44-222ENST00000526025 FAM53AQ6NSI3 398 aaPredicted RBP16.77■□□□□ 0.28
CD44-222ENST00000526025 DYNAPQ8N1N2 210 aa16.77■□□□□ 0.28
CD44-222ENST00000526025 ZDHHC22Q8N966 263 aa16.77■□□□□ 0.28
CD44-222ENST00000526025 DTX3Q8N9I9 347 aa16.77■□□□□ 0.28
CD44-222ENST00000526025 OR10J5Q8NHC4 309 aa16.77■□□□□ 0.28
CD44-222ENST00000526025 ST6GALNAC6Q969X2 333 aa16.77■□□□□ 0.28
CD44-222ENST00000526025 DIRAS2Q96HU8 199 aa16.77■□□□□ 0.28
CD44-222ENST00000526025 ESM1Q9NQ30 184 aa16.77■□□□□ 0.28
CD44-222ENST00000526025 OR1A1Q9P1Q5 309 aa16.77■□□□□ 0.28
CD44-222ENST00000526025 DNAJC9-AS1A6NH13 148 aa16.76■□□□□ 0.27
CD44-222ENST00000526025 S100A5P33763 92 aa16.76■□□□□ 0.27
CD44-222ENST00000526025 CEACAM6P40199 344 aa16.76■□□□□ 0.27
CD44-222ENST00000526025 ZNF816Q0VGE8 651 aaPredicted RBP16.76■□□□□ 0.27
CD44-222ENST00000526025 PYHIN1Q6K0P9 492 aa16.76■□□□□ 0.27
CD44-222ENST00000526025 FAM71F2Q6NXP2 309 aa16.76■□□□□ 0.27
CD44-222ENST00000526025 SNX29P2Q8IUI4 249 aa16.76■□□□□ 0.27
CD44-222ENST00000526025 OR8H3Q8N146 312 aa16.76■□□□□ 0.27
CD44-222ENST00000526025 RPEQ96AT9 228 aa16.76■□□□□ 0.27
CD44-222ENST00000526025 IFT46Q9NQC8 304 aa16.76■□□□□ 0.27
CD44-222ENST00000526025 ATRQ13535 2644 aa16.76■□□□□ 0.27
CD44-222ENST00000526025 A0A1W2PPE3 182 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 BTBD17A6NE02 478 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 CTDSPLO15194 276 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 SLC31A2O15432 143 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 HOXA3O43365 443 aaPredicted RBP16.75■□□□□ 0.27
CD44-222ENST00000526025 TXNL1O43396 289 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 VENTXO95231 258 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 TNFSF8P32971 234 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 SLC9A3R2Q15599 337 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 GVQW1Q8N7I0 195 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 SNAPC3Q92966 411 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 TOMM40LQ969M1 308 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 ABHD1Q96SE0 405 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 SOSTQ9BQB4 213 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 IFI27L2Q9H2X8 130 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 RDH8Q9NYR8 311 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 HILPDAQ9Y5L2 63 aa16.75■□□□□ 0.27
CD44-222ENST00000526025 TRIM77I1YAP6 450 aa16.74■□□□□ 0.27
CD44-222ENST00000526025 BET1O15155 118 aa16.74■□□□□ 0.27
CD44-222ENST00000526025 LANCL1O43813 399 aa16.74■□□□□ 0.27
CD44-222ENST00000526025 RNASE1P07998 156 aaKnown RBP16.74■□□□□ 0.27
CD44-222ENST00000526025 RCVRNP35243 200 aa16.74■□□□□ 0.27
CD44-222ENST00000526025 ARPC4P59998 168 aa16.74■□□□□ 0.27
CD44-222ENST00000526025 UBA52P62987 128 aaKnown RBP16.74■□□□□ 0.27
CD44-222ENST00000526025 H1FOOQ8IZA3 346 aaPredicted RBP16.74■□□□□ 0.27
CD44-222ENST00000526025 GCDHQ92947 438 aaPredicted RBP16.74■□□□□ 0.27
CD44-222ENST00000526025 SSX3Q99909 188 aa16.74■□□□□ 0.27
CD44-222ENST00000526025 GINS4Q9BRT9 223 aa16.74■□□□□ 0.27
CD44-222ENST00000526025 AGMATQ9BSE5 352 aa16.74■□□□□ 0.27
CD44-222ENST00000526025 C11orf54Q9H0W9 315 aaPredicted RBP16.74■□□□□ 0.27
CD44-222ENST00000526025 PIPOXQ9P0Z9 390 aa16.74■□□□□ 0.27
CD44-222ENST00000526025 HSD17B6O14756 317 aa16.73■□□□□ 0.27
CD44-222ENST00000526025 RAB29O14966 203 aa16.73■□□□□ 0.27
CD44-222ENST00000526025 IGHV4-59P01825 116 aa16.73■□□□□ 0.27
CD44-222ENST00000526025 GAPDHP04406 335 aaKnown RBP16.73■□□□□ 0.27
CD44-222ENST00000526025 BRS3P32247 399 aa16.73■□□□□ 0.27
CD44-222ENST00000526025 TAS2R46P59540 309 aa16.73■□□□□ 0.27
CD44-222ENST00000526025 RPL15P61313 204 aaKnown RBP16.73■□□□□ 0.27
CD44-222ENST00000526025 SSBP1Q04837 148 aaKnown RBP16.73■□□□□ 0.27
CD44-222ENST00000526025 HABP2Q14520 560 aaPredicted RBP16.73■□□□□ 0.27
CD44-222ENST00000526025 LIAT1Q6ZQX7 453 aa16.73■□□□□ 0.27
CD44-222ENST00000526025 ODF3L1Q8IXM7 274 aa16.73■□□□□ 0.27
CD44-222ENST00000526025 LYG1Q8N1E2 194 aa16.73■□□□□ 0.27
CD44-222ENST00000526025 OR5AP2Q8NGF4 316 aa16.73■□□□□ 0.27
CD44-222ENST00000526025 ABCB10Q9NRK6 738 aa16.73■□□□□ 0.27
CD44-222ENST00000526025 NECAP2Q9NVZ3 263 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms