RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 HDDC2Q7Z4H3 204 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 ABHD12BQ7Z5M8 362 aaPredicted RBP2.62□□□□□ -1.99
CD44-219ENST00000525685 OAFQ86UD1 273 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 MKXQ8IYA7 352 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 HS3ST5Q8IZT8 346 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 LINC00471Q8N535 108 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 CLDN22Q8N7P3 220 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 WDR31Q8NA23 367 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 OR8D4Q8NGM9 314 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 OR6N1Q8NGY5 312 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 OR52N1Q8NH53 320 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 LHFPL5Q8TAF8 219 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 MAGEE2Q8TD90 523 aaPredicted RBP2.62□□□□□ -1.99
CD44-219ENST00000525685 CD300LFQ8TDQ1 290 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 GNPDA2Q8TDQ7 276 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 C7orf33Q8WU49 177 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 PIGCQ92535 297 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 POP5Q969H6 163 aaKnown RBP2.62□□□□□ -1.99
CD44-219ENST00000525685 MYDGFQ969H8 173 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 RASD2Q96D21 266 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 DUS3LQ96G46 650 aaKnown RBP2.62□□□□□ -1.99
CD44-219ENST00000525685 SLC25A44Q96H78 314 aaPredicted RBP2.62□□□□□ -1.99
CD44-219ENST00000525685 Q96M85 177 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 NIPSNAP1Q9BPW8 284 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 PLA2G12AQ9BZM1 189 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 SLC22A4Q9H015 551 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 TXNIPQ9H3M7 391 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 METTL8Q9H825 291 aaKnown RBP2.62□□□□□ -1.99
CD44-219ENST00000525685 PLEKHF2Q9H8W4 249 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 NOX3Q9HBY0 568 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 DIABLOQ9NR28 239 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 TMEM38BQ9NVV0 291 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 GLTPQ9NZD2 209 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 IL36GQ9NZH8 169 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 AK6Q9Y3D8 172 aaKnown RBP2.62□□□□□ -1.99
CD44-219ENST00000525685 MYO18BQ8IUG5 2567 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 TENM4Q6N022 2769 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 DOPEY2Q9Y3R5 2298 aa2.62□□□□□ -1.99
CD44-219ENST00000525685 IGHV1-18A0A0C4DH31 117 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 WI2-2373I1.2A0A1W2PRP0 233 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 RAB19A4D1S5 217 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 LRP5LA4QPB2 252 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 A6NIZ1 184 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 ZNF98A6NK75 572 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 PCP4L1A6NKN8 68 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 TRDCB7Z8K6 153 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 ATP6V1G2-DDX39BF2Z307 99 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 K7EQM0 130 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 M0R1B8 84 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 BHLHE40O14503 412 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 XKRYO14609 159 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 GNGT2O14610 69 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 SLC22A1O15245 554 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 SCGNO76038 276 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 SOX14O95416 240 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 HLA-HP01893 362 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 FABP1P07148 127 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 MMP7P09237 267 aaPredicted RBP2.61□□□□□ -1.99
CD44-219ENST00000525685 OR4E1P0C645 316 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 CECR9P0C854 216 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 COX5BP10606 129 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 CBR1P16152 277 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 CTLA4P16410 223 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 GSTM3P21266 225 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 ZNF83P51522 516 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 IDH3GP51553 393 aaPredicted RBP2.61□□□□□ -1.99
CD44-219ENST00000525685 HNRNPA3P51991 378 aaKnown RBP2.61□□□□□ -1.99
CD44-219ENST00000525685 ATP5IP56385 69 aaPredicted RBP2.61□□□□□ -1.99
CD44-219ENST00000525685 UBE2NP61088 152 aaKnown RBP2.61□□□□□ -1.99
CD44-219ENST00000525685 RAP1BP61224 184 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 RAP1AP62834 184 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 TGFBR3Q03167 851 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 MAB21L1Q13394 359 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 HIST3H3Q16695 136 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 CLEC12AQ5QGZ9 265 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 TTC23Q5W5X9 447 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 RPL13AP3Q6NVV1 102 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 SMARCD3Q6STE5 483 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 Q6ZN92 141 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 RASSF6Q6ZTQ3 369 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 SSX8Q7RTT4 187 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 MDP1Q86V88 176 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 SLC22A24Q8N4F4 322 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 ARIH2OSQ8N7S6 290 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 CCDC71LQ8N9Z2 235 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 SDR9C7Q8NEX9 313 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 OR52L1Q8NGH7 329 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 MITD1Q8WV92 249 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 TSEN15Q8WW01 171 aaKnown RBP2.61□□□□□ -1.99
CD44-219ENST00000525685 PYDC1Q8WXC3 89 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 MUCL1Q96DR8 90 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 ZNF799Q96GE5 643 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 ZNF75AQ96N20 296 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 ERMAPQ96PL5 475 aaPredicted RBP2.61□□□□□ -1.99
CD44-219ENST00000525685 SLC38A2Q96QD8 506 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 HIST1H4GQ99525 98 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 C1QTNF6Q9BXI9 259 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 GABARAPL1Q9H0R8 117 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 SYT4Q9H2B2 425 aa2.61□□□□□ -1.99
CD44-219ENST00000525685 PDP1Q9P0J1 537 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms