RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 MADCAM1Q13477 382 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 SPCS2Q15005 226 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 PPP1R7Q15435 360 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 MPPED2Q15777 294 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 LY6EQ16553 131 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 CEACAM21Q3KPI0 293 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 ALKBH6Q3KRA9 238 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 KRTAP21-2Q3LI59 83 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 SLC22A6Q4U2R8 563 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 CCDC92Q53HC0 331 aaPredicted RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 SPRNQ5BIV9 151 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 C6orf136Q5SQH8 315 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 TPTE2P1Q5T6R2 138 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 C1orf134Q5TEV5 83 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 Q5VSD8 79 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 ZNF660Q6AZW8 331 aaPredicted RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 OR2T2Q6IF00 324 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 FAHD1Q6P587 224 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 HAGHLQ6PII5 290 aaPredicted RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 DEGS2Q6QHC5 323 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 FAM131AQ6UXB0 335 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 ZYG11AQ6WRX3 759 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 IL34Q6ZMJ4 242 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 ACP7Q6ZNF0 438 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 C3orf62Q6ZUJ4 267 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 CCDC80Q76M96 950 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 MRPL21Q7Z2W9 205 aaKnown RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 FAM122BQ7Z309 247 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 LHFPL4Q7Z7J7 247 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 CMC1Q7Z7K0 106 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 MKXQ8IYA7 352 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 DYNAPQ8N1N2 210 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 PNKDQ8N490 385 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 FAM216BQ8N7L0 139 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 LRRC75AQ8NAA5 344 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 C15orf53Q8NAA6 179 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 TSPAN14Q8NG11 270 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 NPBQ8NG41 125 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 OR5A2Q8NGI9 324 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 OR5D16Q8NGK9 328 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 OR2T10Q8NGZ9 312 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 OR9G1Q8NH87 305 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 ZNF420Q8TAQ5 688 aaPredicted RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 TCP10LQ8TDR4 215 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 LRRC29Q8WV35 223 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 C17orf50Q8WW18 174 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 OR5P3Q8WZ94 311 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 RGP1Q92546 391 aaPredicted RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 DCUN1D4Q92564 292 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 HIST1H2ACQ93077 130 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 FAM104AQ969W3 186 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 SLC25A36Q96CQ1 311 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 OTUB1Q96FW1 271 aaPredicted RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 PKNOX2Q96KN3 472 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 TEX37Q96LM6 180 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 SPAG8Q99932 426 aaPredicted RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 UPK3BQ9BT76 320 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 C6orf62Q9GZU0 229 aaPredicted RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 ALX4Q9H161 411 aaPredicted RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 OR51I2Q9H344 312 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 CAB39LQ9H9S4 337 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 NMNAT1Q9HAN9 279 aaPredicted RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 ROPN1Q9HAT0 212 aaPredicted RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 NEK6Q9HC98 313 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 PLSCR3Q9NRY6 295 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 UFSP2Q9NUQ7 469 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 C1orf123Q9NWV4 160 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 IFNKQ9P0W0 207 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 MARCOQ9UEW3 520 aaPredicted RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 DCDC2Q9UHG0 476 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 RIMS3Q9UJD0 308 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 COPS3Q9UNS2 423 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 RPL36Q9Y3U8 105 aaKnown RBP1.03□□□□□ -2.24
CD44-212ENST00000524922 KCNE3Q9Y6H6 103 aa1.03□□□□□ -2.24
CD44-212ENST00000524922 TRGV10A0A0A0MS01 117 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 KBTBD11-OT1A0A1B0GTJ5 212 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 SPRR5A0A1B0GTR4 108 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 TMEM189A5PLL7 270 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 SMIM23A6NLE4 172 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 ZNF729A6NN14 1252 aaPredicted RBP1.02□□□□□ -2.25
CD44-212ENST00000524922 ZNF705EA8MWA4 302 aaPredicted RBP1.02□□□□□ -2.25
CD44-212ENST00000524922 ZNF878C9JN71 531 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 J3QT63 122 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 SDHDO14521 159 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 ITGB1BP1O14713 200 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 CDIPTO14735 213 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 NME6O75414 186 aaPredicted RBP1.02□□□□□ -2.25
CD44-212ENST00000524922 USH2AO75445 5202 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 CA11O75493 328 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 OR7A10O76100 309 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 HAND1O96004 215 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 MOSP00540 346 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 SERPINA1P01009 418 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 IGLV3-1P01715 115 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 CD14P08571 375 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 P0C879 139 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 RBMY1CP0DJD4 496 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 C8orf88P0DMB2 117 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 CGB3P0DN86 165 aa1.02□□□□□ -2.25
CD44-212ENST00000524922 CGB7P0DN87 165 aa1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms