RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 LINC00312Q9Y6C7 94 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 CHD3Q12873 2000 aaKnown RBP8.32□□□□□ -1.08
VPS13B-212ENST00000524330 POLEQ07864 2286 aa8.32□□□□□ -1.08
VPS13B-212ENST00000524330 TRAV14DV4A0A0A6YYC5 116 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 A0A1B0GU03 582 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 C15orf65H3BRN8 121 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 ADAM20O43506 726 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 BCL2L11O43521 198 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 SCGB1D2O95969 90 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 LYL1P12980 280 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 MMP9P14780 707 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 ZNF16P17020 682 aaPredicted RBP8.31□□□□□ -1.08
VPS13B-212ENST00000524330 CXCL2P19875 107 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 SSTR2P30874 369 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 AKR1C2P52895 323 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 VAMP2P63027 116 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 IFITM2Q01629 132 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 TFF3Q07654 80 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 Q3ZCU0 254 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 Q5BKY6 102 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 EIF5AL1Q6IS14 154 aaKnown RBP8.31□□□□□ -1.08
VPS13B-212ENST00000524330 TEX261Q6UWH6 196 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 FAM219AQ8IW50 185 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 SELENOHQ8IZQ5 122 aaKnown RBP8.31□□□□□ -1.08
VPS13B-212ENST00000524330 DRAM1Q8N682 238 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 SLC35G3Q8N808 338 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 OR51H1Q8NH63 302 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 NEUROG1Q92886 237 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 LSM10Q969L4 123 aaKnown RBP8.31□□□□□ -1.08
VPS13B-212ENST00000524330 ADTRPQ96IZ2 230 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 OR10C1Q96KK4 312 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 TP53RKQ96S44 253 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 OR2D2Q9H210 308 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 IDI2-AS1Q9NZ38 188 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 KAAG1Q9UBP8 84 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 GAB2Q9UQC2 676 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 PRELID3BQ9Y3B1 194 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 LSM5Q9Y4Y9 91 aaKnown RBP8.31□□□□□ -1.08
VPS13B-212ENST00000524330 U3KQ87 197 aa8.31□□□□□ -1.08
VPS13B-212ENST00000524330 IGF2RP11717 2491 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 SPTBN4Q9H254 2564 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 DYSFO75923 2080 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 TRBV23-1A0A0A0MS06 115 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 hCG_1809904A0A1W2PP81 198 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 A0A1W2PPE2 198 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 A0A1W2PR64 198 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 A0A1W2PRV1 198 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 F5H0A9 414 aaPredicted RBP8.3□□□□□ -1.08
VPS13B-212ENST00000524330 K7EPK0 472 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 TNFSF12O43508 249 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 GPR137BO60478 399 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 ZG16O60844 167 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 CLDN1O95832 211 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 PLAUP00749 431 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 DAOP14920 347 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 GRNP28799 593 aaKnown RBP8.3□□□□□ -1.08
VPS13B-212ENST00000524330 SSTR5P35346 364 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 NKX2-1P43699 371 aaPredicted RBP8.3□□□□□ -1.08
VPS13B-212ENST00000524330 RAB32Q13637 225 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 SNTB1Q13884 538 aaKnown RBP8.3□□□□□ -1.08
VPS13B-212ENST00000524330 MST1LQ2TV78 715 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 MORN2Q502X0 79 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 SPRNQ5BIV9 151 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 GPR157Q5UAW9 335 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 LYZL2Q7Z4W2 148 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 FAM71E2Q8N5Q1 922 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 TPRX1Q8N7U7 411 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 OR1S1Q8NH92 325 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 TCTEX1D2Q8WW35 142 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 AQP10Q96PS8 301 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 SLC25A31Q9H0C2 315 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 GFOD1Q9NXC2 390 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 PRR13Q9NZ81 148 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 POMT1Q9Y6A1 747 aa8.3□□□□□ -1.08
VPS13B-212ENST00000524330 PRR14LQ5THK1 2151 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 CLEC18AA5D8T8 446 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 MED6O75586 246 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 DEDDO75618 318 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 LY86O95711 162 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 TPT1P13693 172 aaKnown RBP8.29□□□□□ -1.08
VPS13B-212ENST00000524330 PPP1CCP36873 323 aaKnown RBP8.29□□□□□ -1.08
VPS13B-212ENST00000524330 P2RY1P47900 373 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 ARHGDIBP52566 201 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 RPL31P62899 125 aaKnown RBP8.29□□□□□ -1.08
VPS13B-212ENST00000524330 LTC4SQ16873 150 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 FAM201AQ5SY85 155 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 FAM216BQ8N7L0 139 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 CLEC18CQ8NCF0 446 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 ZNF680Q8NEM1 530 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 RFESDQ8TAC1 157 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 UBALD1Q8TB05 177 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 LRRC20Q8TCA0 184 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 H1FXQ92522 213 aaKnown RBP8.29□□□□□ -1.08
VPS13B-212ENST00000524330 PHYHIPLQ96FC7 376 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 ZNF714Q96N38 554 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 S1PR3Q99500 378 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 AIFM2Q9BRQ8 373 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 ABHD14AQ9BUJ0 271 aa8.29□□□□□ -1.08
VPS13B-212ENST00000524330 ZNF471Q9BX82 626 aaPredicted RBP8.29□□□□□ -1.08
VPS13B-212ENST00000524330 LINC00574Q9H8X3 128 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms