RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 ST3GAL6Q9Y274 331 aa13□□□□□ -0.33
PVT1-220ENST00000524165 CA2P00918 260 aa12.99□□□□□ -0.33
PVT1-220ENST00000524165 HBZP02008 142 aa12.99□□□□□ -0.33
PVT1-220ENST00000524165 RSU1Q15404 277 aa12.99□□□□□ -0.33
PVT1-220ENST00000524165 FAM98BQ52LJ0 330 aaKnown RBP12.99□□□□□ -0.33
PVT1-220ENST00000524165 C6orf183Q5T699 404 aa12.99□□□□□ -0.33
PVT1-220ENST00000524165 FAM131AQ6UXB0 335 aa12.99□□□□□ -0.33
PVT1-220ENST00000524165 OR5T1Q8NG75 326 aa12.99□□□□□ -0.33
PVT1-220ENST00000524165 OR13C3Q8NGS6 347 aa12.99□□□□□ -0.33
PVT1-220ENST00000524165 GHSRQ92847 366 aa12.99□□□□□ -0.33
PVT1-220ENST00000524165 CLCC1Q96S66 551 aa12.99□□□□□ -0.33
PVT1-220ENST00000524165 TINAGL1Q9GZM7 467 aaPredicted RBP12.99□□□□□ -0.33
PVT1-220ENST00000524165 NDE1Q9NXR1 346 aa12.99□□□□□ -0.33
PVT1-220ENST00000524165 RTL8CO15255 209 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 SULT1B1O43704 296 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 RBBP9O75884 186 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 FADS2O95864 444 aaKnown RBP12.98□□□□□ -0.33
PVT1-220ENST00000524165 TRIM25Q14258 630 aaKnown RBP12.98□□□□□ -0.33
PVT1-220ENST00000524165 RBMS2Q15434 407 aaKnown RBP12.98□□□□□ -0.33
PVT1-220ENST00000524165 TRAT1Q6PIZ9 186 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 ASCL4Q6XD76 172 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 FAM220AQ7Z4H9 259 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 LINC00596Q86U02 117 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 PRR18Q8N4B5 295 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 STX19Q8N4C7 294 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 OR51A4Q8NGJ6 313 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 OR52B4Q8NGK2 314 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 OR10K1Q8NGX5 313 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 OR1L1Q8NH94 360 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 CPNE2Q96FN4 548 aaPredicted RBP12.98□□□□□ -0.33
PVT1-220ENST00000524165 RNF5Q99942 180 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 PRRG3Q9BZD7 231 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 OR2S2Q9NQN1 319 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 FRRS1LQ9P0K9 344 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 GNG8Q9UK08 70 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 TRAPPC2LQ9UL33 140 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 APLNQ9ULZ1 77 aa12.98□□□□□ -0.33
PVT1-220ENST00000524165 SLC22A1O15245 554 aa12.97□□□□□ -0.33
PVT1-220ENST00000524165 CST1P01037 141 aa12.97□□□□□ -0.33
PVT1-220ENST00000524165 FOLR2P14207 255 aa12.97□□□□□ -0.33
PVT1-220ENST00000524165 OR3A3P47888 321 aa12.97□□□□□ -0.33
PVT1-220ENST00000524165 MNAT1P51948 309 aa12.97□□□□□ -0.33
PVT1-220ENST00000524165 RBM11P57052 281 aaKnown RBP12.97□□□□□ -0.33
PVT1-220ENST00000524165 EFNB1P98172 346 aa12.97□□□□□ -0.33
PVT1-220ENST00000524165 ANKRD55Q3KP44 614 aa12.97□□□□□ -0.33
PVT1-220ENST00000524165 SYT6Q5T7P8 510 aaPredicted RBP12.97□□□□□ -0.33
PVT1-220ENST00000524165 FAM71F2Q6NXP2 309 aa12.97□□□□□ -0.33
PVT1-220ENST00000524165 OR5D14Q8NGL3 314 aa12.97□□□□□ -0.33
PVT1-220ENST00000524165 GRPEL2Q8TAA5 225 aa12.97□□□□□ -0.33
PVT1-220ENST00000524165 NEK7Q8TDX7 302 aa12.97□□□□□ -0.33
PVT1-220ENST00000524165 TNFAIP8L1Q8WVP5 186 aa12.97□□□□□ -0.33
PVT1-220ENST00000524165 MRPS24Q96EL2 167 aaKnown RBP12.97□□□□□ -0.33
PVT1-220ENST00000524165 TMEM68Q96MH6 324 aa12.97□□□□□ -0.33
PVT1-220ENST00000524165 PARP12Q9H0J9 701 aaKnown RBP12.97□□□□□ -0.33
PVT1-220ENST00000524165 MBNL3Q9NUK0 354 aaKnown RBP12.97□□□□□ -0.33
PVT1-220ENST00000524165 METTL1Q9UBP6 276 aaKnown RBP12.97□□□□□ -0.33
PVT1-220ENST00000524165 FBXL7Q9UJT9 491 aa12.97□□□□□ -0.33
PVT1-220ENST00000524165 SAA2-SAA4A0A096LPE2 208 aa12.96□□□□□ -0.33
PVT1-220ENST00000524165 OR5H14A6NHG9 310 aa12.96□□□□□ -0.33
PVT1-220ENST00000524165 C2orf70A6NJV1 201 aa12.96□□□□□ -0.33
PVT1-220ENST00000524165 GABRPO00591 440 aa12.96□□□□□ -0.33
PVT1-220ENST00000524165 HTR3BO95264 441 aa12.96□□□□□ -0.33
PVT1-220ENST00000524165 GSTP1P09211 210 aaKnown RBP12.96□□□□□ -0.33
PVT1-220ENST00000524165 SAA2P0DJI9 122 aaPredicted RBP12.96□□□□□ -0.33
PVT1-220ENST00000524165 ANXA8P13928 327 aa12.96□□□□□ -0.33
PVT1-220ENST00000524165 CRISP1P54107 249 aa12.96□□□□□ -0.33
PVT1-220ENST00000524165 ADARB1P78563 741 aaKnown RBP12.96□□□□□ -0.33
PVT1-220ENST00000524165 FXYD3Q14802 87 aa12.96□□□□□ -0.33
PVT1-220ENST00000524165 FDX2Q6P4F2 183 aa12.96□□□□□ -0.33
PVT1-220ENST00000524165 KCTD20Q7Z5Y7 419 aa12.96□□□□□ -0.33
PVT1-220ENST00000524165 ZNF575Q86XF7 245 aa12.96□□□□□ -0.33
PVT1-220ENST00000524165 GID4Q8IVV7 300 aa12.96□□□□□ -0.33
PVT1-220ENST00000524165 OR52N1Q8NH53 320 aa12.96□□□□□ -0.33
PVT1-220ENST00000524165 ELAC2Q9BQ52 826 aaKnown RBP12.96□□□□□ -0.33
PVT1-220ENST00000524165 DMBT1Q9UGM3 2413 aaPredicted RBP12.96□□□□□ -0.34
PVT1-220ENST00000524165 BMPR1BO00238 502 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 GEMIN2O14893 280 aaKnown RBP12.95□□□□□ -0.34
PVT1-220ENST00000524165 MC5RP33032 325 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 NANOS2P60321 138 aaKnown RBP12.95□□□□□ -0.34
PVT1-220ENST00000524165 DEFA5Q01523 94 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 PSG5Q15238 335 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 MPV17LQ2QL34 196 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 TP53I3Q53FA7 332 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 LY6G6FQ5SQ64 297 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 ATAD3CQ5T2N8 411 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 SERPINA12Q8IW75 414 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 MAPKAPK5-AS1Q8N8E1 139 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 OR10H4Q8NGA5 316 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 C11orf45Q8TAV5 145 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 TMEM163Q8TC26 289 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 FBXL17Q9UF56 701 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 WARS2Q9UGM6 360 aaKnown RBP12.95□□□□□ -0.34
PVT1-220ENST00000524165 ENOPH1Q9UHY7 261 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 JPT1Q9UK76 154 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 ING4Q9UNL4 249 aa12.95□□□□□ -0.34
PVT1-220ENST00000524165 KIR2DL5BA0A0G2JN68 375 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 KIR2DL5BA0A0G2JPC4 375 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 SNX3O60493 162 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 YPEL1O60688 119 aa12.94□□□□□ -0.34
PVT1-220ENST00000524165 CDK2AP2O75956 126 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms