RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 OR51D1Q8NGF3 324 aa12.81□□□□□ -0.36
CLN8-206ENST00000523237 CNBD2Q96M20 576 aa12.81□□□□□ -0.36
CLN8-206ENST00000523237 S1PR3Q99500 378 aa12.81□□□□□ -0.36
CLN8-206ENST00000523237 GON7Q9BXV9 100 aa12.81□□□□□ -0.36
CLN8-206ENST00000523237 ACOT13Q9NPJ3 140 aa12.81□□□□□ -0.36
CLN8-206ENST00000523237 PLSCR3Q9NRY6 295 aa12.81□□□□□ -0.36
CLN8-206ENST00000523237 NECAP2Q9NVZ3 263 aa12.81□□□□□ -0.36
CLN8-206ENST00000523237 BLOC1S6Q9UL45 172 aa12.81□□□□□ -0.36
CLN8-206ENST00000523237 AK6Q9Y3D8 172 aaKnown RBP12.81□□□□□ -0.36
CLN8-206ENST00000523237 NOTCH3Q9UM47 2321 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 LINC01548A6NM66 108 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 NAPSAO96009 420 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 CALRP27797 417 aaKnown RBP12.8□□□□□ -0.36
CLN8-206ENST00000523237 MAP2K4P45985 399 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 RPL23AP62750 156 aaKnown RBP12.8□□□□□ -0.36
CLN8-206ENST00000523237 FABP5Q01469 135 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 TBCEQ15813 527 aaPredicted RBP12.8□□□□□ -0.36
CLN8-206ENST00000523237 RAB11BQ15907 218 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 MOB1BQ7L9L4 216 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 C5orf24Q7Z6I8 188 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 SVOPQ8N4V2 548 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 FAM71E2Q8N5Q1 922 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 OR2AK2Q8NG84 335 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 IL1F10Q8WWZ1 152 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 GFI1Q99684 422 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 LPAR5Q9H1C0 372 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 RIMS4Q9H426 269 aaPredicted RBP12.8□□□□□ -0.36
CLN8-206ENST00000523237 ZFP57Q9NU63 452 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 STEAP1Q9UHE8 339 aa12.8□□□□□ -0.36
CLN8-206ENST00000523237 A0A0A6YYD4 124 aa12.79□□□□□ -0.36
CLN8-206ENST00000523237 RRP9O43818 475 aaKnown RBP12.79□□□□□ -0.36
CLN8-206ENST00000523237 DUS4LO95620 317 aaKnown RBP12.79□□□□□ -0.36
CLN8-206ENST00000523237 SLC6A1P30531 599 aa12.79□□□□□ -0.36
CLN8-206ENST00000523237 F2RL1P55085 397 aa12.79□□□□□ -0.36
CLN8-206ENST00000523237 ZNF880Q6PDB4 577 aa12.79□□□□□ -0.36
CLN8-206ENST00000523237 TEX38Q6PEX7 206 aa12.79□□□□□ -0.36
CLN8-206ENST00000523237 ZNF367Q7RTV3 350 aa12.79□□□□□ -0.36
CLN8-206ENST00000523237 ODF3L1Q8IXM7 274 aa12.79□□□□□ -0.36
CLN8-206ENST00000523237 FAM89BQ8N5H3 189 aa12.79□□□□□ -0.36
CLN8-206ENST00000523237 SETD6Q8TBK2 473 aa12.79□□□□□ -0.36
CLN8-206ENST00000523237 RCC1LQ96I51 464 aaKnown RBP12.79□□□□□ -0.36
CLN8-206ENST00000523237 NUDT19A8MXV4 375 aa12.78□□□□□ -0.36
CLN8-206ENST00000523237 SOCS1O15524 211 aa12.78□□□□□ -0.36
CLN8-206ENST00000523237 SOX6P35712 828 aa12.78□□□□□ -0.36
CLN8-206ENST00000523237 PSMD7P51665 324 aa12.78□□□□□ -0.36
CLN8-206ENST00000523237 MMDQ15546 238 aa12.78□□□□□ -0.36
CLN8-206ENST00000523237 PNLIPRP3Q17RR3 467 aa12.78□□□□□ -0.36
CLN8-206ENST00000523237 FOXB2Q5VYV0 432 aa12.78□□□□□ -0.36
CLN8-206ENST00000523237 NABP2Q9BQ15 211 aa12.78□□□□□ -0.36
CLN8-206ENST00000523237 MRPL20Q9BYC9 149 aaKnown RBP12.78□□□□□ -0.36
CLN8-206ENST00000523237 AK3Q9UIJ7 227 aa12.78□□□□□ -0.36
CLN8-206ENST00000523237 HSF4Q9ULV5 492 aa12.78□□□□□ -0.36
CLN8-206ENST00000523237 RAB26Q9ULW5 256 aa12.78□□□□□ -0.36
CLN8-206ENST00000523237 MGAT4AQ9UM21 535 aa12.78□□□□□ -0.36
CLN8-206ENST00000523237 V9GY05 133 aa12.78□□□□□ -0.36
CLN8-206ENST00000523237 SAA2-SAA4A0A096LPE2 208 aa12.77□□□□□ -0.37
CLN8-206ENST00000523237 TRBV6-6A0A0A6YYG2 114 aa12.77□□□□□ -0.37
CLN8-206ENST00000523237 SAA2P0DJI9 122 aaPredicted RBP12.77□□□□□ -0.37
CLN8-206ENST00000523237 CLDN12P56749 244 aa12.77□□□□□ -0.37
CLN8-206ENST00000523237 FAM71F2Q6NXP2 309 aa12.77□□□□□ -0.37
CLN8-206ENST00000523237 Q6ZPA2 131 aa12.77□□□□□ -0.37
CLN8-206ENST00000523237 ZNF833PQ6ZTB9 187 aa12.77□□□□□ -0.37
CLN8-206ENST00000523237 LINC00482Q8N8I6 264 aa12.77□□□□□ -0.37
CLN8-206ENST00000523237 KLHL30-AS1Q8NEE0 82 aa12.77□□□□□ -0.37
CLN8-206ENST00000523237 MRAPQ8TCY5 172 aa12.77□□□□□ -0.37
CLN8-206ENST00000523237 FAM3DQ96BQ1 224 aa12.77□□□□□ -0.37
CLN8-206ENST00000523237 RBMXL1Q96E39 390 aaKnown RBP12.77□□□□□ -0.37
CLN8-206ENST00000523237 HSPB9Q9BQS6 159 aa12.77□□□□□ -0.37
CLN8-206ENST00000523237 C12orf4Q9NQ89 552 aa12.77□□□□□ -0.37
CLN8-206ENST00000523237 AURKAIP1Q9NWT8 199 aaPredicted RBP12.77□□□□□ -0.37
CLN8-206ENST00000523237 PIPOXQ9P0Z9 390 aa12.77□□□□□ -0.37
CLN8-206ENST00000523237 RAB29O14966 203 aa12.76□□□□□ -0.37
CLN8-206ENST00000523237 SLC2A2P11168 524 aaPredicted RBP12.76□□□□□ -0.37
CLN8-206ENST00000523237 VDAC1P21796 283 aa12.76□□□□□ -0.37
CLN8-206ENST00000523237 OR3A3P47888 321 aa12.76□□□□□ -0.37
CLN8-206ENST00000523237 THBS3P49746 956 aa12.76□□□□□ -0.37
CLN8-206ENST00000523237 VEGFCP49767 419 aa12.76□□□□□ -0.37
CLN8-206ENST00000523237 ACTBP60709 375 aa12.76□□□□□ -0.37
CLN8-206ENST00000523237 SSX1Q16384 188 aa12.76□□□□□ -0.37
CLN8-206ENST00000523237 C2orf76Q3KRA6 126 aa12.76□□□□□ -0.37
CLN8-206ENST00000523237 CXorf66Q5JRM2 361 aaPredicted RBP12.76□□□□□ -0.37
CLN8-206ENST00000523237 ETV3LQ6ZN32 361 aa12.76□□□□□ -0.37
CLN8-206ENST00000523237 C8orf86Q6ZUL3 223 aa12.76□□□□□ -0.37
CLN8-206ENST00000523237 ZNF695Q8IW36 515 aa12.76□□□□□ -0.37
CLN8-206ENST00000523237 MRPL41Q8IXM3 137 aaKnown RBP12.76□□□□□ -0.37
CLN8-206ENST00000523237 OR56B1Q8NGI3 324 aa12.76□□□□□ -0.37
CLN8-206ENST00000523237 ZNF251Q9BRH9 671 aa12.76□□□□□ -0.37
CLN8-206ENST00000523237 HDHD3Q9BSH5 251 aaPredicted RBP12.76□□□□□ -0.37
CLN8-206ENST00000523237 IFI27L2Q9H2X8 130 aa12.76□□□□□ -0.37
CLN8-206ENST00000523237 SLC23A1Q9UHI7 598 aa12.76□□□□□ -0.37
CLN8-206ENST00000523237 ZNF107Q9UII5 783 aaPredicted RBP12.76□□□□□ -0.37
CLN8-206ENST00000523237 FOXI3A8MTJ6 420 aaPredicted RBP12.75□□□□□ -0.37
CLN8-206ENST00000523237 PDCD5O14737 125 aa12.75□□□□□ -0.37
CLN8-206ENST00000523237 ST8SIA5O15466 376 aa12.75□□□□□ -0.37
CLN8-206ENST00000523237 DENRO43583 198 aaKnown RBP12.75□□□□□ -0.37
CLN8-206ENST00000523237 IGF1P05019 195 aa12.75□□□□□ -0.37
CLN8-206ENST00000523237 ELANEP08246 267 aa12.75□□□□□ -0.37
CLN8-206ENST00000523237 ZBTB25P24278 435 aa12.75□□□□□ -0.37
CLN8-206ENST00000523237 MYCNOSP40205 109 aa12.75□□□□□ -0.37
CLN8-206ENST00000523237 PRKDCP78527 4128 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms