RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 YPEL2Q96QA6 119 aa16.26■□□□□ 0.19
SDCBP-209ENST00000522243 TM2D1Q9BX74 207 aa16.26■□□□□ 0.19
SDCBP-209ENST00000522243 MRPL20Q9BYC9 149 aaKnown RBP16.26■□□□□ 0.19
SDCBP-209ENST00000522243 TPRKBQ9Y3C4 175 aa16.26■□□□□ 0.19
SDCBP-209ENST00000522243 A0A0A6YYD4 124 aa16.25■□□□□ 0.19
SDCBP-209ENST00000522243 WI2-2373I1.2A0A1W2PRP0 233 aa16.25■□□□□ 0.19
SDCBP-209ENST00000522243 TMEM14DPA8MWL7 114 aa16.25■□□□□ 0.19
SDCBP-209ENST00000522243 SLC22A1O15245 554 aa16.25■□□□□ 0.19
SDCBP-209ENST00000522243 SOX6P35712 828 aa16.25■□□□□ 0.19
SDCBP-209ENST00000522243 OR3A3P47888 321 aa16.25■□□□□ 0.19
SDCBP-209ENST00000522243 HTD2P86397 168 aa16.25■□□□□ 0.19
SDCBP-209ENST00000522243 P2RY14Q15391 338 aa16.25■□□□□ 0.19
SDCBP-209ENST00000522243 MMDQ15546 238 aa16.25■□□□□ 0.19
SDCBP-209ENST00000522243 IL1F10Q8WWZ1 152 aa16.25■□□□□ 0.19
SDCBP-209ENST00000522243 RITA1Q96K30 269 aa16.25■□□□□ 0.19
SDCBP-209ENST00000522243 NABP2Q9BQ15 211 aa16.25■□□□□ 0.19
SDCBP-209ENST00000522243 CHMP1AQ9HD42 196 aaPredicted RBP16.25■□□□□ 0.19
SDCBP-209ENST00000522243 AK6Q9Y3D8 172 aaKnown RBP16.25■□□□□ 0.19
SDCBP-209ENST00000522243 RRP9O43818 475 aaKnown RBP16.24■□□□□ 0.19
SDCBP-209ENST00000522243 RGS11O94810 467 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 CNTFRP26992 372 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 RAB25P57735 213 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 QRFPP83859 136 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 DEFB136Q30KP8 78 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 CXorf66Q5JRM2 361 aaPredicted RBP16.24■□□□□ 0.19
SDCBP-209ENST00000522243 TMEM91Q6ZNR0 172 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 SVOPQ8N4V2 548 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 OR6M1Q8NGM8 313 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 P2RX4Q99571 388 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 GFI1Q99684 422 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 GON7Q9BXV9 100 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 CCDC90BQ9GZT6 254 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 DUSP21Q9H596 190 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 PLGRKTQ9HBL7 147 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 PLEKHJ1Q9NW61 149 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 ABRACLQ9P1F3 81 aa16.24■□□□□ 0.19
SDCBP-209ENST00000522243 ST8SIA5O15466 376 aa16.23■□□□□ 0.19
SDCBP-209ENST00000522243 RGS10O43665 173 aa16.23■□□□□ 0.19
SDCBP-209ENST00000522243 BPNT1O95861 308 aa16.23■□□□□ 0.19
SDCBP-209ENST00000522243 CD37P11049 281 aa16.23■□□□□ 0.19
SDCBP-209ENST00000522243 VDAC1P21796 283 aa16.23■□□□□ 0.19
SDCBP-209ENST00000522243 SLC6A1P30531 599 aa16.23■□□□□ 0.19
SDCBP-209ENST00000522243 ACTBP60709 375 aa16.23■□□□□ 0.19
SDCBP-209ENST00000522243 DEFB121Q5J5C9 76 aa16.23■□□□□ 0.19
SDCBP-209ENST00000522243 OR2AK2Q8NG84 335 aa16.23■□□□□ 0.19
SDCBP-209ENST00000522243 RAX2Q96IS3 184 aa16.23■□□□□ 0.19
SDCBP-209ENST00000522243 LPAR5Q9H1C0 372 aa16.23■□□□□ 0.19
SDCBP-209ENST00000522243 ZNF107Q9UII5 783 aaPredicted RBP16.23■□□□□ 0.19
SDCBP-209ENST00000522243 LRRC42Q9Y546 428 aa16.23■□□□□ 0.19
SDCBP-209ENST00000522243 SAA2-SAA4A0A096LPE2 208 aa16.22■□□□□ 0.19
SDCBP-209ENST00000522243 CCL24O00175 119 aa16.22■□□□□ 0.19
SDCBP-209ENST00000522243 SOCS1O15524 211 aa16.22■□□□□ 0.19
SDCBP-209ENST00000522243 NAPSAO96009 420 aa16.22■□□□□ 0.19
SDCBP-209ENST00000522243 SAA2P0DJI9 122 aaPredicted RBP16.22■□□□□ 0.19
SDCBP-209ENST00000522243 CFHR3Q02985 330 aa16.22■□□□□ 0.19
SDCBP-209ENST00000522243 EGFEM1PQ0D2K5 195 aa16.22■□□□□ 0.19
SDCBP-209ENST00000522243 FOXE3Q13461 319 aa16.22■□□□□ 0.19
SDCBP-209ENST00000522243 TPBGQ13641 420 aa16.22■□□□□ 0.19
SDCBP-209ENST00000522243 ZNF833PQ6ZTB9 187 aa16.22■□□□□ 0.19
SDCBP-209ENST00000522243 DPF1Q92782 380 aa16.22■□□□□ 0.19
SDCBP-209ENST00000522243 KCTD7Q96MP8 289 aa16.22■□□□□ 0.19
SDCBP-209ENST00000522243 ZNF251Q9BRH9 671 aa16.22■□□□□ 0.19
SDCBP-209ENST00000522243 HDHD3Q9BSH5 251 aaPredicted RBP16.22■□□□□ 0.19
SDCBP-209ENST00000522243 ELANEP08246 267 aa16.21■□□□□ 0.19
SDCBP-209ENST00000522243 ARSBP15848 533 aa16.21■□□□□ 0.19
SDCBP-209ENST00000522243 MAP2K4P45985 399 aa16.21■□□□□ 0.19
SDCBP-209ENST00000522243 LY6G6FQ5SQ64 297 aa16.21■□□□□ 0.19
SDCBP-209ENST00000522243 ZNF880Q6PDB4 577 aa16.21■□□□□ 0.19
SDCBP-209ENST00000522243 URM1Q9BTM9 101 aaKnown RBP16.21■□□□□ 0.19
SDCBP-209ENST00000522243 MCRIP2Q9BUT9 160 aaKnown RBP16.21■□□□□ 0.19
SDCBP-209ENST00000522243 GPR61Q9BZJ8 451 aa16.21■□□□□ 0.19
SDCBP-209ENST00000522243 PARP12Q9H0J9 701 aaKnown RBP16.21■□□□□ 0.19
SDCBP-209ENST00000522243 IFI27L2Q9H2X8 130 aa16.21■□□□□ 0.19
SDCBP-209ENST00000522243 STEAP1Q9UHE8 339 aa16.21■□□□□ 0.19
SDCBP-209ENST00000522243 AK3Q9UIJ7 227 aa16.21■□□□□ 0.19
SDCBP-209ENST00000522243 SLC17A2O00624 439 aa16.2■□□□□ 0.18
SDCBP-209ENST00000522243 CDX1P47902 265 aaPredicted RBP16.2■□□□□ 0.18
SDCBP-209ENST00000522243 CLDN12P56749 244 aa16.2■□□□□ 0.18
SDCBP-209ENST00000522243 MLLT11Q13015 90 aaPredicted RBP16.2■□□□□ 0.18
SDCBP-209ENST00000522243 ANKRD60Q9BZ19 345 aa16.2■□□□□ 0.18
SDCBP-209ENST00000522243 ISYNA1Q9NPH2 558 aa16.2■□□□□ 0.18
SDCBP-209ENST00000522243 WSB1Q9Y6I7 421 aa16.2■□□□□ 0.18
SDCBP-209ENST00000522243 NBR2O15453 112 aa16.19■□□□□ 0.18
SDCBP-209ENST00000522243 IGHG4P01861 327 aa16.19■□□□□ 0.18
SDCBP-209ENST00000522243 IGF1P05019 195 aa16.19■□□□□ 0.18
SDCBP-209ENST00000522243 CPEP16870 476 aa16.19■□□□□ 0.18
SDCBP-209ENST00000522243 CRHBPP24387 322 aa16.19■□□□□ 0.18
SDCBP-209ENST00000522243 FABP5Q01469 135 aa16.19■□□□□ 0.18
SDCBP-209ENST00000522243 TRAM1Q15629 374 aa16.19■□□□□ 0.18
SDCBP-209ENST00000522243 RAB11BQ15907 218 aa16.19■□□□□ 0.18
SDCBP-209ENST00000522243 RPL39P5Q59GN2 51 aa16.19■□□□□ 0.18
SDCBP-209ENST00000522243 GLDNQ6ZMI3 551 aaPredicted RBP16.19■□□□□ 0.18
SDCBP-209ENST00000522243 RNF152Q8N8N0 203 aa16.19■□□□□ 0.18
SDCBP-209ENST00000522243 ABHD14BQ96IU4 210 aa16.19■□□□□ 0.18
SDCBP-209ENST00000522243 MGLLQ99685 303 aa16.19■□□□□ 0.18
SDCBP-209ENST00000522243 PARP11Q9NR21 331 aa16.19■□□□□ 0.18
SDCBP-209ENST00000522243 PIPOXQ9P0Z9 390 aa16.19■□□□□ 0.18
SDCBP-209ENST00000522243 G3V318 75 aa16.18■□□□□ 0.18
SDCBP-209ENST00000522243 ATP6V0E1O15342 81 aa16.18■□□□□ 0.18
SDCBP-209ENST00000522243 ARL6IP5O75915 188 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms