RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 RDH8Q9NYR8 311 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 GNG12Q9UBI6 72 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 OR2W1Q9Y3N9 320 aa10.74□□□□□ -0.69
CPNE3-205ENST00000522240 MALRD1Q5VYJ5 2156 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 IGHV2-70DA0A0C4DH43 119 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 hCG_1809904A0A1W2PP81 198 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 A0A1W2PPE2 198 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 A0A1W2PR64 198 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 A0A1W2PRV1 198 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 FAM172BPA6NC97 362 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 USF1P22415 310 aaPredicted RBP10.73□□□□□ -0.69
CPNE3-205ENST00000522240 PAX2Q02962 417 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 GNMTQ14749 295 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 PRAMEF5Q5TYX0 476 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 KRTAP1-3Q8IUG1 177 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 OR52L2PQ8NGH6 319 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 C1orf159Q96HA4 380 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 FOXC2Q99958 501 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 MMP28Q9H239 520 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 OR2S2Q9NQN1 319 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 VSIG4Q9Y279 399 aa10.73□□□□□ -0.69
CPNE3-205ENST00000522240 KIAA2026Q5HYC2 2103 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 A0A087X0M5 115 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 A0A1B0GX30 115 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 INMT-MINDY4F8WBC2 141 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 ARPC1BO15143 372 aaKnown RBP10.72□□□□□ -0.69
CPNE3-205ENST00000522240 PEX14O75381 377 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 H2AFB2P0C5Z0 115 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 PGAM2P15259 253 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 OMGP23515 440 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 ZFP36P26651 326 aaKnown RBP10.72□□□□□ -0.69
CPNE3-205ENST00000522240 CD34P28906 385 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 PPP1CCP36873 323 aaKnown RBP10.72□□□□□ -0.69
CPNE3-205ENST00000522240 CEACAM6P40199 344 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 LUMP51884 338 aaPredicted RBP10.72□□□□□ -0.69
CPNE3-205ENST00000522240 FXYD4P59646 89 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 LOXL1Q08397 574 aaPredicted RBP10.72□□□□□ -0.69
CPNE3-205ENST00000522240 MSMO1Q15800 293 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 LPCAT3Q6P1A2 487 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 Q6ZNX1 250 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 SLC38A6Q8IZM9 456 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 OR10V1Q8NGI7 309 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 ZFAND1Q8TCF1 268 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 MARCH1Q8TCQ1 289 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 ZNF486Q96H40 463 aaPredicted RBP10.72□□□□□ -0.69
CPNE3-205ENST00000522240 TMPRSS13Q9BYE2 586 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 GPR132Q9UNW8 380 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 KPTNQ9Y664 436 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 SESN1Q9Y6P5 492 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 DOCK11Q5JSL3 2073 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 ABCA2Q9BZC7 2435 aa10.72□□□□□ -0.69
CPNE3-205ENST00000522240 TRAV6A0A075B6T7 132 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 IGHV3-43A0A0B4J1X8 118 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 FAM157AC9JC47 383 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 EREGO14944 169 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 PRAF2O60831 178 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 MMP23AO75900 390 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 SLC22A5O76082 557 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 CTSDP07339 412 aaPredicted RBP10.71□□□□□ -0.69
CPNE3-205ENST00000522240 IGHV1-8P0DP01 117 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 IGHV3-43DP0DP04 118 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 RAB7AP51149 207 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 TAS2R31P59538 309 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 ERVFRD-1P60508 538 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 UBE2MP61081 183 aaKnown RBP10.71□□□□□ -0.69
CPNE3-205ENST00000522240 LCN2P80188 198 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 LTC4SQ16873 150 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 MORN2Q502X0 79 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 C1orf122Q6ZSJ8 110 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 C11orf42Q8N5U0 333 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 C8orf31Q8N9H6 132 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 OR2AK2Q8NG84 335 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 TOMM40LQ969M1 308 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 RSRP1Q9BUV0 290 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 ALX4Q9H161 411 aaPredicted RBP10.71□□□□□ -0.69
CPNE3-205ENST00000522240 ONECUT1Q9UBC0 465 aa10.71□□□□□ -0.69
CPNE3-205ENST00000522240 C14orf166Q9Y224 244 aaKnown RBP10.71□□□□□ -0.69
CPNE3-205ENST00000522240 IGKV1D-13A0A0B4J2D9 117 aa10.7□□□□□ -0.7
CPNE3-205ENST00000522240 DHFRP00374 187 aa10.7□□□□□ -0.7
CPNE3-205ENST00000522240 RLN1P04808 185 aa10.7□□□□□ -0.7
CPNE3-205ENST00000522240 IL5P05113 134 aa10.7□□□□□ -0.7
CPNE3-205ENST00000522240 IGKV1-13P0DP09 117 aa10.7□□□□□ -0.7
CPNE3-205ENST00000522240 RND3P61587 244 aa10.7□□□□□ -0.7
CPNE3-205ENST00000522240 FAHD2BQ6P2I3 314 aaPredicted RBP10.7□□□□□ -0.7
CPNE3-205ENST00000522240 ZNF439Q8NDP4 499 aa10.7□□□□□ -0.7
CPNE3-205ENST00000522240 SECTM1Q8WVN6 248 aa10.7□□□□□ -0.7
CPNE3-205ENST00000522240 FAHD2AQ96GK7 314 aa10.7□□□□□ -0.7
CPNE3-205ENST00000522240 Q96MF0 132 aa10.7□□□□□ -0.7
CPNE3-205ENST00000522240 ABHD14AQ9BUJ0 271 aa10.7□□□□□ -0.7
CPNE3-205ENST00000522240 SLC5A7Q9GZV3 580 aa10.7□□□□□ -0.7
CPNE3-205ENST00000522240 PARP12Q9H0J9 701 aaKnown RBP10.7□□□□□ -0.7
CPNE3-205ENST00000522240 TMEM133Q9H2Q1 129 aa10.7□□□□□ -0.7
CPNE3-205ENST00000522240 C5orf66Q9H5L9 145 aa10.7□□□□□ -0.7
CPNE3-205ENST00000522240 UNKLQ9H9P5 680 aaKnown RBP10.7□□□□□ -0.7
CPNE3-205ENST00000522240 FLVCR2Q9UPI3 526 aa10.7□□□□□ -0.7
CPNE3-205ENST00000522240 B4DSR2 109 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 GPR31O00270 319 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 NFYBP25208 207 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 BAMBIQ13145 260 aa10.69□□□□□ -0.7
CPNE3-205ENST00000522240 BTNL3Q6UXE8 466 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms