RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 RAB3CQ96E17 227 aa16.46■□□□□ 0.23
TRIM35-203ENST00000521253 YPEL2Q96QA6 119 aa16.46■□□□□ 0.23
TRIM35-203ENST00000521253 CMSS1Q9BQ75 279 aaKnown RBP16.46■□□□□ 0.23
TRIM35-203ENST00000521253 CENPOQ9BU64 300 aa16.46■□□□□ 0.23
TRIM35-203ENST00000521253 MOB4Q9Y3A3 225 aa16.46■□□□□ 0.23
TRIM35-203ENST00000521253 SH2D7A6NKC9 451 aaPredicted RBP16.45■□□□□ 0.22
TRIM35-203ENST00000521253 M0QZ24 198 aa16.45■□□□□ 0.22
TRIM35-203ENST00000521253 M0QZK8 103 aa16.45■□□□□ 0.22
TRIM35-203ENST00000521253 RAB27BO00194 218 aa16.45■□□□□ 0.22
TRIM35-203ENST00000521253 RGS11O94810 467 aa16.45■□□□□ 0.22
TRIM35-203ENST00000521253 TMEM11P17152 192 aa16.45■□□□□ 0.22
TRIM35-203ENST00000521253 HLA-DRB3P79483 266 aa16.45■□□□□ 0.22
TRIM35-203ENST00000521253 LY6G6FQ5SQ64 297 aa16.45■□□□□ 0.22
TRIM35-203ENST00000521253 HIST2H2BDQ6DRA6 164 aa16.45■□□□□ 0.22
TRIM35-203ENST00000521253 SFXN4Q6P4A7 337 aa16.45■□□□□ 0.22
TRIM35-203ENST00000521253 TGIF2LXQ8IUE1 241 aa16.45■□□□□ 0.22
TRIM35-203ENST00000521253 C11orf44Q8N8P7 122 aa16.45■□□□□ 0.22
TRIM35-203ENST00000521253 WNT10AQ9GZT5 417 aa16.45■□□□□ 0.22
TRIM35-203ENST00000521253 Q9N2K0 584 aa16.45■□□□□ 0.22
TRIM35-203ENST00000521253 DAPK2Q9UIK4 370 aa16.45■□□□□ 0.22
TRIM35-203ENST00000521253 PEX14O75381 377 aa16.44■□□□□ 0.22
TRIM35-203ENST00000521253 CLEC2LP0C7M8 214 aa16.44■□□□□ 0.22
TRIM35-203ENST00000521253 GNB3P16520 340 aa16.44■□□□□ 0.22
TRIM35-203ENST00000521253 MXD1Q05195 221 aa16.44■□□□□ 0.22
TRIM35-203ENST00000521253 EBI3Q14213 229 aa16.44■□□□□ 0.22
TRIM35-203ENST00000521253 TREML4Q6UXN2 200 aa16.44■□□□□ 0.22
TRIM35-203ENST00000521253 IZUMO1Q8IYV9 350 aa16.44■□□□□ 0.22
TRIM35-203ENST00000521253 OR2AK2Q8NG84 335 aa16.44■□□□□ 0.22
TRIM35-203ENST00000521253 WIPF2Q8TF74 440 aaPredicted RBP16.44■□□□□ 0.22
TRIM35-203ENST00000521253 VCX3AQ9NNX9 186 aa16.44■□□□□ 0.22
TRIM35-203ENST00000521253 MGAT4AQ9UM21 535 aa16.44■□□□□ 0.22
TRIM35-203ENST00000521253 WNK1Q9H4A3 2382 aa16.43■□□□□ 0.22
TRIM35-203ENST00000521253 METTL21EPA6NDL7 271 aa16.43■□□□□ 0.22
TRIM35-203ENST00000521253 ZNF736B4DX44 427 aaPredicted RBP16.43■□□□□ 0.22
TRIM35-203ENST00000521253 MFNGO00587 321 aa16.43■□□□□ 0.22
TRIM35-203ENST00000521253 TXNL1O43396 289 aa16.43■□□□□ 0.22
TRIM35-203ENST00000521253 LANCL1O43813 399 aa16.43■□□□□ 0.22
TRIM35-203ENST00000521253 LPLP06858 475 aa16.43■□□□□ 0.22
TRIM35-203ENST00000521253 ODF3L1Q8IXM7 274 aa16.43■□□□□ 0.22
TRIM35-203ENST00000521253 EAF1Q96JC9 268 aaPredicted RBP16.43■□□□□ 0.22
TRIM35-203ENST00000521253 ATG5Q9H1Y0 275 aa16.43■□□□□ 0.22
TRIM35-203ENST00000521253 A0A075B6Q4 140 aa16.42■□□□□ 0.22
TRIM35-203ENST00000521253 SCTP09683 121 aa16.42■□□□□ 0.22
TRIM35-203ENST00000521253 CD3GP09693 182 aa16.42■□□□□ 0.22
TRIM35-203ENST00000521253 SNRPBP14678 240 aaKnown RBP16.42■□□□□ 0.22
TRIM35-203ENST00000521253 HIST1H1DP16402 221 aaKnown RBP16.42■□□□□ 0.22
TRIM35-203ENST00000521253 CD1BP29016 333 aa16.42■□□□□ 0.22
TRIM35-203ENST00000521253 MRPS15P82914 257 aaKnown RBP16.42■□□□□ 0.22
TRIM35-203ENST00000521253 Q8N6K4 173 aa16.42■□□□□ 0.22
TRIM35-203ENST00000521253 OR2T10Q8NGZ9 312 aa16.42■□□□□ 0.22
TRIM35-203ENST00000521253 RBMXL1Q96E39 390 aaKnown RBP16.42■□□□□ 0.22
TRIM35-203ENST00000521253 PARP12Q9H0J9 701 aaKnown RBP16.42■□□□□ 0.22
TRIM35-203ENST00000521253 IFI27L2Q9H2X8 130 aa16.42■□□□□ 0.22
TRIM35-203ENST00000521253 OR1A1Q9P1Q5 309 aa16.42■□□□□ 0.22
TRIM35-203ENST00000521253 SLC23A1Q9UHI7 598 aa16.42■□□□□ 0.22
TRIM35-203ENST00000521253 ST8SIA5O15466 376 aa16.41■□□□□ 0.22
TRIM35-203ENST00000521253 FGF16O43320 207 aa16.41■□□□□ 0.22
TRIM35-203ENST00000521253 CD28P10747 220 aa16.41■□□□□ 0.22
TRIM35-203ENST00000521253 OR3A3P47888 321 aa16.41■□□□□ 0.22
TRIM35-203ENST00000521253 TIMM50Q3ZCQ8 353 aa16.41■□□□□ 0.22
TRIM35-203ENST00000521253 C9orf152Q5JTZ5 239 aa16.41■□□□□ 0.22
TRIM35-203ENST00000521253 C5orf56Q8N8D9 126 aa16.41■□□□□ 0.22
TRIM35-203ENST00000521253 LGALS14Q8TCE9 139 aa16.41■□□□□ 0.22
TRIM35-203ENST00000521253 YIPF6Q96EC8 236 aa16.41■□□□□ 0.22
TRIM35-203ENST00000521253 SAA2-SAA4A0A096LPE2 208 aa16.4■□□□□ 0.22
TRIM35-203ENST00000521253 IGKV1-6A0A0C4DH72 117 aa16.4■□□□□ 0.22
TRIM35-203ENST00000521253 TRIM64CA6NLI5 447 aa16.4■□□□□ 0.22
TRIM35-203ENST00000521253 SERPINE3A8MV23 424 aa16.4■□□□□ 0.22
TRIM35-203ENST00000521253 TRDCB7Z8K6 153 aa16.4■□□□□ 0.22
TRIM35-203ENST00000521253 RRP9O43818 475 aaKnown RBP16.4■□□□□ 0.22
TRIM35-203ENST00000521253 FBXO24O75426 580 aa16.4■□□□□ 0.22
TRIM35-203ENST00000521253 TSPAN15O95858 294 aa16.4■□□□□ 0.22
TRIM35-203ENST00000521253 FCGR3AP08637 254 aa16.4■□□□□ 0.22
TRIM35-203ENST00000521253 SAA2P0DJI9 122 aaPredicted RBP16.4■□□□□ 0.22
TRIM35-203ENST00000521253 ZBTB25P24278 435 aa16.4■□□□□ 0.22
TRIM35-203ENST00000521253 TGFBR1P36897 503 aa16.4■□□□□ 0.22
TRIM35-203ENST00000521253 LSAMPQ13449 338 aa16.4■□□□□ 0.22
TRIM35-203ENST00000521253 C2orf68Q2NKX9 166 aa16.4■□□□□ 0.22
TRIM35-203ENST00000521253 ZNF833PQ6ZTB9 187 aa16.4■□□□□ 0.22
TRIM35-203ENST00000521253 HSPA12AO43301 675 aa16.39■□□□□ 0.21
TRIM35-203ENST00000521253 AIREO43918 545 aa16.39■□□□□ 0.21
TRIM35-203ENST00000521253 MOSP00540 346 aa16.39■□□□□ 0.21
TRIM35-203ENST00000521253 CEACAM6P40199 344 aa16.39■□□□□ 0.21
TRIM35-203ENST00000521253 MRPL20Q9BYC9 149 aaKnown RBP16.39■□□□□ 0.21
TRIM35-203ENST00000521253 MEGF8Q7Z7M0 2845 aa16.38■□□□□ 0.21
TRIM35-203ENST00000521253 NCBP2LA6PVI3 153 aaKnown RBP16.38■□□□□ 0.21
TRIM35-203ENST00000521253 ITGB1BP1O14713 200 aa16.38■□□□□ 0.21
TRIM35-203ENST00000521253 ARFRP1Q13795 201 aa16.38■□□□□ 0.21
TRIM35-203ENST00000521253 IDNKQ5T6J7 187 aa16.38■□□□□ 0.21
TRIM35-203ENST00000521253 MAFIPQ8WZ33 124 aa16.38■□□□□ 0.21
TRIM35-203ENST00000521253 NABP2Q9BQ15 211 aa16.38■□□□□ 0.21
TRIM35-203ENST00000521253 AGMATQ9BSE5 352 aa16.38■□□□□ 0.21
TRIM35-203ENST00000521253 C11orf54Q9H0W9 315 aaPredicted RBP16.38■□□□□ 0.21
TRIM35-203ENST00000521253 MMP27Q9H306 513 aa16.38■□□□□ 0.21
TRIM35-203ENST00000521253 PLSCR3Q9NRY6 295 aa16.38■□□□□ 0.21
TRIM35-203ENST00000521253 ZNF230Q9UIE0 474 aaPredicted RBP16.38■□□□□ 0.21
TRIM35-203ENST00000521253 ELF5Q9UKW6 265 aaPredicted RBP16.38■□□□□ 0.21
TRIM35-203ENST00000521253 FABP7O15540 132 aa16.37■□□□□ 0.21
TRIM35-203ENST00000521253 CSF1P09603 554 aa16.37■□□□□ 0.21
TRIM35-203ENST00000521253 LSM3P62310 102 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms