RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 IGHV3-7P01780 117 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 ZNF735P0CB33 412 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 NFYBP25208 207 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 CD34P28906 385 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 SCGB2A2Q13296 93 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 TMEM30BQ3MIR4 351 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 VAX1Q5SQQ9 334 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 STEAP3Q658P3 488 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 STEAP1BQ6NZ63 245 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 H1FOOQ8IZA3 346 aaPredicted RBP12.47□□□□□ -0.41
LSM1-203ENST00000520755 BCL6BQ8N143 479 aaPredicted RBP12.47□□□□□ -0.41
LSM1-203ENST00000520755 OR52M1Q8NGK5 317 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 TOLLIPQ9H0E2 274 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 TMEM133Q9H2Q1 129 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 OR2S2Q9NQN1 319 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 TAS2R8Q9NYW2 309 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 EHFQ9NZC4 300 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 ZNRD1Q9P1U0 126 aa12.47□□□□□ -0.41
LSM1-203ENST00000520755 SOX21Q9Y651 276 aaPredicted RBP12.47□□□□□ -0.41
LSM1-203ENST00000520755 PLA2G10O15496 165 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 TUSC2O75896 110 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 OR5H8P0DN80 308 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 TBPP20226 339 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 UBE2E1P51965 193 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 DYRK1AQ13627 763 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 MORN2Q502X0 79 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 ACTBL2Q562R1 376 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 TOMM5Q8N4H5 51 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 OR13D1Q8NGV5 346 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 SLC6A7Q99884 636 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 OCEL1Q9H607 264 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 RAB9BQ9NP90 201 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 NECAP2Q9NVZ3 263 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 GNG12Q9UBI6 72 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 TBC1D24Q9ULP9 559 aa12.46□□□□□ -0.41
LSM1-203ENST00000520755 IGHV2-26A0A0B4J1V2 119 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 A0A1W2PPE3 182 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 NPFFO15130 113 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 YPEL1O60688 119 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 RAB3DO95716 219 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 AKAIN1P0CW23 69 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 NFYAP23511 347 aaPredicted RBP12.45□□□□□ -0.42
LSM1-203ENST00000520755 ZBTB25P24278 435 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 BTCP35070 178 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 GNG10P50151 68 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 ZNF134P52741 427 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 RNASE10Q5GAN6 216 aaKnown RBP12.45□□□□□ -0.42
LSM1-203ENST00000520755 ZNF57Q68EA5 555 aaPredicted RBP12.45□□□□□ -0.42
LSM1-203ENST00000520755 OR56B4Q8NH76 319 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 OR10J5Q8NHC4 309 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 BORCS5Q969J3 196 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 MRGPRFQ96AM1 343 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 YPEL2Q96QA6 119 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 FXYD6Q9H0Q3 95 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 HRASLSQ9HDD0 168 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 RDH8Q9NYR8 311 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 PSG11Q9UQ72 335 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 NAV3Q8IVL0 2385 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 ZFHX3Q15911 3703 aa12.45□□□□□ -0.42
LSM1-203ENST00000520755 CUBNO60494 3623 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 IGKV1D-13A0A0B4J2D9 117 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 LINC00854A0A1B0GVQ3 168 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 ODF3BA8MYP8 253 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 ARG1P05089 322 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 CTXN2P0C2S0 81 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 IGKV1-13P0DP09 117 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 AADACP22760 399 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 CEACAM6P40199 344 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 OR3A3P47888 321 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 BPIFB3P59826 476 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 LY6G6FQ5SQ64 297 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 LDLRAD2Q5SZI1 272 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 LHFPL1Q86WI0 220 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 PIP4P2Q8N4L2 257 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 ZNF596Q8TC21 504 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 GINS4Q9BRT9 223 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 CLEC7AQ9BXN2 247 aa12.44□□□□□ -0.42
LSM1-203ENST00000520755 A0A0U1RQK1 487 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 MDFIC2A0A1B0GVS7 189 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 HSPA12AO43301 675 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 IGLV1-47P01700 117 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 AMY2AP04746 511 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 FCGR2CP31995 323 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 SAA4P35542 130 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 LGALS4P56470 323 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 AP3S2P59780 193 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 MEF2DQ14814 521 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 Q3ZCU0 254 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 CT45A1Q5HYN5 189 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 ZNF626Q68DY1 528 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 SLC25A48Q6ZT89 311 aaKnown RBP12.43□□□□□ -0.42
LSM1-203ENST00000520755 C9orf139Q6ZV77 190 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 ABHD12Q8N2K0 398 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 ARRDC1Q8N5I2 433 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 OR11H6Q8NGC7 330 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 CT45A3Q8NHU0 189 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 C5orf30Q96GV9 206 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 AGMATQ9BSE5 352 aa12.43□□□□□ -0.42
LSM1-203ENST00000520755 C11orf54Q9H0W9 315 aaPredicted RBP12.43□□□□□ -0.42
LSM1-203ENST00000520755 IFI27L2Q9H2X8 130 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms