RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 DMC1Q14565 340 aa5□□□□□ -1.61
LSM1-202ENST00000520286 PTGES3Q15185 160 aaKnown RBP5□□□□□ -1.61
LSM1-202ENST00000520286 RSPO1Q2MKA7 263 aaPredicted RBP5□□□□□ -1.61
LSM1-202ENST00000520286 CLLU1OSQ5K130 101 aa5□□□□□ -1.61
LSM1-202ENST00000520286 AVPI1Q5T686 147 aa5□□□□□ -1.61
LSM1-202ENST00000520286 ADNP2Q6IQ32 1131 aa5□□□□□ -1.61
LSM1-202ENST00000520286 MRPL55Q7Z7F7 128 aaKnown RBP5□□□□□ -1.61
LSM1-202ENST00000520286 ZNF429Q86V71 674 aa5□□□□□ -1.61
LSM1-202ENST00000520286 LRRC28Q86X40 367 aaPredicted RBP5□□□□□ -1.61
LSM1-202ENST00000520286 FAM9CQ8IZT9 166 aa5□□□□□ -1.61
LSM1-202ENST00000520286 STK40Q8N2I9 435 aa5□□□□□ -1.61
LSM1-202ENST00000520286 TRAM1L1Q8N609 369 aa5□□□□□ -1.61
LSM1-202ENST00000520286 GPR26Q8NDV2 337 aa5□□□□□ -1.61
LSM1-202ENST00000520286 OR51G1Q8NGK1 321 aa5□□□□□ -1.61
LSM1-202ENST00000520286 OR2T35Q8NGX2 323 aa5□□□□□ -1.61
LSM1-202ENST00000520286 OR51E1Q8TCB6 317 aa5□□□□□ -1.61
LSM1-202ENST00000520286 HAVCR2Q8TDQ0 301 aa5□□□□□ -1.61
LSM1-202ENST00000520286 MITD1Q8WV92 249 aa5□□□□□ -1.61
LSM1-202ENST00000520286 RAB1CQ92928 201 aa5□□□□□ -1.61
LSM1-202ENST00000520286 ISOC2Q96AB3 205 aa5□□□□□ -1.61
LSM1-202ENST00000520286 WFIKKN1Q96NZ8 548 aa5□□□□□ -1.61
LSM1-202ENST00000520286 NIPSNAP1Q9BPW8 284 aa5□□□□□ -1.61
LSM1-202ENST00000520286 ABCG5Q9H222 651 aa5□□□□□ -1.61
LSM1-202ENST00000520286 ZNF302Q9NR11 478 aa5□□□□□ -1.61
LSM1-202ENST00000520286 RBM22Q9NW64 420 aaKnown RBP eCLIP5□□□□□ -1.61
LSM1-202ENST00000520286 RPS6KB2Q9UBS0 482 aa5□□□□□ -1.61
LSM1-202ENST00000520286 FBXL3Q9UKT7 428 aa5□□□□□ -1.61
LSM1-202ENST00000520286 NUP205Q92621 2012 aa5□□□□□ -1.61
LSM1-202ENST00000520286 MYO10Q9HD67 2058 aa5□□□□□ -1.61
LSM1-202ENST00000520286 PLXNA4Q9HCM2 1894 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 RAB19A4D1S5 217 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 NKX2-6A6NCS4 301 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 M0R129 80 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 PHYHO14832 338 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 GSTZ1O43708 216 aaPredicted RBP4.99□□□□□ -1.61
LSM1-202ENST00000520286 SS18L1O75177 396 aaPredicted RBP4.99□□□□□ -1.61
LSM1-202ENST00000520286 GCM2O75603 506 aaPredicted RBP4.99□□□□□ -1.61
LSM1-202ENST00000520286 RP2O75695 350 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 GADD45GO95257 159 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 RAB36O95755 333 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 IFNGP01579 166 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 EIF4EP06730 217 aaKnown RBP4.99□□□□□ -1.61
LSM1-202ENST00000520286 ZNF806P0C7X5 589 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 PRPS2P11908 318 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 MUC1P15941 1255 aaPredicted RBP4.99□□□□□ -1.61
LSM1-202ENST00000520286 RAB4AP20338 218 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 PVALBP20472 110 aaPredicted RBP4.99□□□□□ -1.61
LSM1-202ENST00000520286 NFYAP23511 347 aaPredicted RBP4.99□□□□□ -1.61
LSM1-202ENST00000520286 GABRR2P28476 465 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 S100A11P31949 105 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 S100A3P33764 101 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 ACTR1BP42025 376 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 STC1P52823 247 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 CTBP2P56545 445 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 AP1S1P61966 158 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 FABP5Q01469 135 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 LAMTOR4Q0VGL1 99 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 HNRNPA1L2Q32P51 320 aaKnown RBP4.99□□□□□ -1.61
LSM1-202ENST00000520286 ZNF660Q6AZW8 331 aaPredicted RBP4.99□□□□□ -1.61
LSM1-202ENST00000520286 SLC16A13Q7RTY0 426 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 VKORC1L1Q8N0U8 176 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 ATPAF2Q8N5M1 289 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 TBC1D19Q8N5T2 526 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 KRTCAP2Q8N6L1 136 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 LRRC52Q8N7C0 313 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 TCEAL4Q96EI5 215 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 IMP4Q96G21 291 aaKnown RBP4.99□□□□□ -1.61
LSM1-202ENST00000520286 DOHHQ9BU89 302 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 PDCD10Q9BUL8 212 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 ALX4Q9H161 411 aaPredicted RBP4.99□□□□□ -1.61
LSM1-202ENST00000520286 METTL17Q9H7H0 456 aaPredicted RBP4.99□□□□□ -1.61
LSM1-202ENST00000520286 RASL12Q9NYN1 266 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 MED11Q9P086 117 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 COMMD3Q9UBI1 195 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 METTL1Q9UBP6 276 aaKnown RBP4.99□□□□□ -1.61
LSM1-202ENST00000520286 PSG8Q9UQ74 426 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 ATG2AQ2TAZ0 1938 aa4.99□□□□□ -1.61
LSM1-202ENST00000520286 PIKFYVEQ9Y2I7 2098 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 SETXQ7Z333 2677 aaKnown RBP4.98□□□□□ -1.61
LSM1-202ENST00000520286 IRGMA1A4Y4 181 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 A6NDN8 102 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 RFXANKO14593 260 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 B4GALT5O43286 388 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 CD5LO43866 347 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 RDH16O75452 317 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 POP7O75817 140 aaKnown RBP4.98□□□□□ -1.61
LSM1-202ENST00000520286 IL5P05113 134 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 KRTAP1-4P0C5Y4 121 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 UBBP0CG47 229 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 PPIBP23284 216 aaKnown RBP4.98□□□□□ -1.61
LSM1-202ENST00000520286 OMGP23515 440 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 CFHR2P36980 270 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 KCNJ3P48549 501 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 SPCS3P61009 180 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 RAB4BP61018 213 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 UBA52P62987 128 aaKnown RBP4.98□□□□□ -1.61
LSM1-202ENST00000520286 SELENOWP63302 87 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 CDNFQ49AH0 187 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 FAM74A1Q5RGS3 127 aa4.98□□□□□ -1.61
LSM1-202ENST00000520286 DNLZQ5SXM8 178 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms