RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 AKR1C2P52895 323 aa2.74□□□□□ -1.97
HMGB1P46-201ENST00000520062 BAMBIQ13145 260 aa2.74□□□□□ -1.97
HMGB1P46-201ENST00000520062 PDK2Q15119 407 aa2.74□□□□□ -1.97
HMGB1P46-201ENST00000520062 SPIN3Q5JUX0 258 aa2.74□□□□□ -1.97
HMGB1P46-201ENST00000520062 CMTM2Q8TAZ6 248 aa2.74□□□□□ -1.97
HMGB1P46-201ENST00000520062 CD200R1Q8TD46 325 aa2.74□□□□□ -1.97
HMGB1P46-201ENST00000520062 SLC37A2Q8TED4 501 aa2.74□□□□□ -1.97
HMGB1P46-201ENST00000520062 TVP23CQ96ET8 276 aa2.74□□□□□ -1.97
HMGB1P46-201ENST00000520062 SLC25A20O43772 301 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 E2F6O75461 281 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 AHSA1O95433 338 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 IGLV6-57P01721 117 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 ORM2P19652 201 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 KRTAP10-10P60014 251 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 MLLT11Q13015 90 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 EBPQ15125 230 aaKnown RBP2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 MESTQ5EB52 335 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 ACSBG2Q5FVE4 666 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 LCN8Q6JVE9 175 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 WDR59Q6PJI9 974 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 LYPD6Q86Y78 171 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 HS3ST5Q8IZT8 346 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 ZFAND2AQ8N6M9 145 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 ITFG2Q969R8 447 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 SLC25A44Q96H78 314 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 ABHD14BQ96IU4 210 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 MED18Q9BUE0 208 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 SPZ1Q9BXG8 430 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 MED28Q9H204 178 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 WASHC3Q9Y3C0 194 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 A0A1W2PP64 1363 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 ABCC11Q96J66 1382 aa2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 COL4A4P53420 1690 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P46-201ENST00000520062 PFDN6O15212 129 aa2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 STK16O75716 305 aa2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 IGLV3-27P01718 113 aa2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 ATP5G1P05496 136 aa2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 OR13C7P0DN81 318 aa2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 OR12D1P0DN82 309 aa2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 CDK2P24941 298 aa2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 CRABP1P29762 137 aa2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 HSPA9P38646 679 aaKnown RBP2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 PDGFRLQ15198 375 aa2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 OGFRL1Q5TC84 451 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 TNFAIP8L2Q6P589 184 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 PIGXQ8TBF5 258 aa2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 RNF133Q8WVZ7 376 aa2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 PKMYT1Q99640 499 aa2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 RTBDNQ9BSG5 229 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 TIPINQ9BVW5 301 aa2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 OR51B4Q9Y5P0 310 aa2.72□□□□□ -1.97
HMGB1P46-201ENST00000520062 MYO5BQ9ULV0 1848 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 LRRN3E7EW58 273 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 H0Y980 276 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 M0QZ92 97 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 CRTAPO75718 401 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 OPRM1P35372 400 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 ACTBP60709 375 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 ACTG1P63261 375 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 HPCAP84074 193 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 TSPAN31Q12999 210 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 CST9Q5W186 159 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 ERMNQ8TAM6 284 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 OR5P3Q8WZ94 311 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 TMBIM1Q969X1 311 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 RAD51AP1Q96B01 352 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 IGF2BP2-AS1Q96M15 143 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 HIGD2AQ9BW72 106 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 C1QTNF6Q9BXI9 259 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 FGFR1OP2Q9NVK5 253 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 DNAJC12Q9UKB3 198 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 VPREB3Q9UKI3 123 aa2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 MRPS16Q9Y3D3 137 aaKnown RBP2.71□□□□□ -1.98
HMGB1P46-201ENST00000520062 A0A1W2PNN7 141 aa2.7□□□□□ -1.98
HMGB1P46-201ENST00000520062 TYMSP04818 313 aa2.7□□□□□ -1.98
HMGB1P46-201ENST00000520062 COL8A2P25067 703 aa2.7□□□□□ -1.98
HMGB1P46-201ENST00000520062 BLVRAP53004 296 aa2.7□□□□□ -1.98
HMGB1P46-201ENST00000520062 FGF12P61328 243 aa2.7□□□□□ -1.98
HMGB1P46-201ENST00000520062 BSPH1Q075Z2 132 aa2.7□□□□□ -1.98
HMGB1P46-201ENST00000520062 TMEM267Q0VDI3 215 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P46-201ENST00000520062 PYDC2Q56P42 97 aa2.7□□□□□ -1.98
HMGB1P46-201ENST00000520062 CCDC122Q5T0U0 273 aa2.7□□□□□ -1.98
HMGB1P46-201ENST00000520062 LRRN1Q6UXK5 716 aa2.7□□□□□ -1.98
HMGB1P46-201ENST00000520062 LY6G5BQ8NDX9 201 aa2.7□□□□□ -1.98
HMGB1P46-201ENST00000520062 DERL2Q9GZP9 239 aa2.7□□□□□ -1.98
HMGB1P46-201ENST00000520062 POLR3HQ9Y535 204 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P46-201ENST00000520062 YLPM1P49750 1951 aaKnown RBP2.7□□□□□ -1.98
HMGB1P46-201ENST00000520062 CEP170Q5SW79 1584 aa2.7□□□□□ -1.98
HMGB1P46-201ENST00000520062 SEC16AO15027 2179 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 TRAV8-1A0A0A6YYK1 113 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 CXCR6O00574 342 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 DEDDO75618 318 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 CDS2O95674 445 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 IL6P05231 212 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 IGHV3-30-3P0DP02 117 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 CXCL2P19875 107 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 CXCL3P19876 107 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 LINC00313P59037 77 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 SNAP25P60880 206 aa2.69□□□□□ -1.98
HMGB1P46-201ENST00000520062 CXCR4P61073 352 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms