RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SCN3BQ9NY72 215 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 CKLFQ9UBR5 152 aa7.47□□□□□ -1.21
HDAC3-215ENST00000519474 A0A1W2PPE3 182 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 OOSP1A8MZH6 123 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 LINC00587B1AMM8 73 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 MCRIP1C9JLW8 97 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 F2RL2O00254 374 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 ITGB1BP1O14713 200 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 ORC5O43913 435 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 SC5DO75845 299 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 APOA1P02647 267 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 CSF1P09603 554 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 CD28P10747 220 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 SRMP19623 302 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 MYF6P23409 242 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 RCVRNP35243 200 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 CEACAM3P40198 252 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 GLP1RP43220 463 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 RPL5P46777 297 aaKnown RBP7.46□□□□□ -1.22
HDAC3-215ENST00000519474 LOXL3P58215 753 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 C1orf100Q5SVJ3 147 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 ZNF497Q6ZNH5 498 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 TMEM91Q6ZNR0 172 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 C5orf24Q7Z6I8 188 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 GAPTQ8N292 157 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 CENPSQ8N2Z9 138 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 ARL11Q969Q4 196 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 MND1Q9BWT6 205 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 RCC2Q9P258 522 aaKnown RBP7.46□□□□□ -1.22
HDAC3-215ENST00000519474 MRPS7Q9Y2R9 242 aaKnown RBP7.46□□□□□ -1.22
HDAC3-215ENST00000519474 TPRKBQ9Y3C4 175 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 PEX16Q9Y5Y5 336 aa7.46□□□□□ -1.22
HDAC3-215ENST00000519474 ANK2Q01484 3957 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 WNK1Q9H4A3 2382 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 TMEM30CPA0ZSE6 113 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 ZNF320A2RRD8 509 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 ADARB2-AS1A8MUL3 147 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 ZNF701M0R085 212 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-215ENST00000519474 MGMTP16455 207 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 FUT3P21217 361 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 SSTR5P35346 364 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 TAGLN2P37802 199 aaKnown RBP7.45□□□□□ -1.22
HDAC3-215ENST00000519474 FHITP49789 147 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 MEOX2P50222 304 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 TPBGQ13641 420 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 RBM39Q14498 530 aaKnown RBP7.45□□□□□ -1.22
HDAC3-215ENST00000519474 SMCO1Q147U7 214 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 SYT6Q5T7P8 510 aaPredicted RBP7.45□□□□□ -1.22
HDAC3-215ENST00000519474 AWAT2Q6E213 333 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 C16orf82Q7Z2V1 217 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 CEACAM19Q7Z692 300 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 LYG1Q8N1E2 194 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 OR52M1Q8NGK5 317 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 OR4K15Q8NH41 348 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 RNASE11Q8TAA1 199 aaKnown RBP7.45□□□□□ -1.22
HDAC3-215ENST00000519474 UBALD1Q8TB05 177 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 DTD1Q8TEA8 209 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 Q96M66 194 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 TMED9Q9BVK6 235 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 ANKRD60Q9BZ19 345 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 SELENOIQ9C0D9 397 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 IFT46Q9NQC8 304 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 RSL24D1Q9UHA3 163 aaKnown RBP7.45□□□□□ -1.22
HDAC3-215ENST00000519474 PUS1Q9Y606 427 aaKnown RBP eCLIP7.45□□□□□ -1.22
HDAC3-215ENST00000519474 NBEAL1Q6ZS30 2694 aa7.45□□□□□ -1.22
HDAC3-215ENST00000519474 UBE2QL1A1L167 161 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 FAM90A10PA6NDY2 464 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 FAM90A7PA6NKC0 464 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 SH2D7A6NKC9 451 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-215ENST00000519474 FAM90A23PA8MXZ1 464 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 UBE2CO00762 179 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 OR2F2O95006 317 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 LPLP06858 475 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 UCHL1P09936 223 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 VSIG8P0DPA2 414 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 RCC1P18754 421 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-215ENST00000519474 CRHBPP24387 322 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 MNDAP41218 407 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 GNG10P50151 68 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 LUMP51884 338 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-215ENST00000519474 ZNF134P52741 427 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 QRFPP83859 136 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 EMX1Q04741 257 aaPredicted RBP7.44□□□□□ -1.22
HDAC3-215ENST00000519474 EBI3Q14213 229 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 MED22Q15528 200 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 ABCA11PQ4W5N1 156 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 OR10K2Q6IF99 312 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 CCDC144NLQ6NUI1 221 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 LINC00311Q8N616 119 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 DRAM1Q8N682 238 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 OR5AU1Q8NGC0 362 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 NEK7Q8TDX7 302 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 PHYHIPQ92561 330 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 THRSPQ92748 146 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 TMEM203Q969S6 136 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 ST6GALNAC6Q969X2 333 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 RPEQ96AT9 228 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 ZNF251Q9BRH9 671 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 SLC25A33Q9BSK2 321 aa7.44□□□□□ -1.22
HDAC3-215ENST00000519474 SEPSECSQ9HD40 501 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms