RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 NPPAP01160 153 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 IGF2P01344 180 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 IGHV1-69P01742 117 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 SERPINA6P08185 405 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 BGNP21810 368 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 IMPA1P29218 277 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 DUPD1Q68J44 220 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 RBM45Q8IUH3 476 aaKnown RBP3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 DRAXINQ8NBI3 349 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 SUMF2Q8NBJ7 301 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 LINC00301Q8NCQ3 95 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 ATP6V1C2Q8NEY4 427 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 OR4A15Q8NGL6 344 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 OR6N2Q8NGY6 317 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 TMBIM1Q969X1 311 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 CCDC124Q96CT7 223 aaKnown RBP3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 RNF170Q96K19 258 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 OR2M2Q96R28 347 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 SDHAF3Q9NRP4 125 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 NLE1Q9NVX2 485 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 EMC3Q9P0I2 261 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 ZNF225Q9UK10 706 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 ST3GAL6Q9Y274 331 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 NOSIPQ9Y314 301 aaKnown RBP3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 GMEB1Q9Y692 573 aa3.25□□□□□ -1.89
HMGB1P23-201ENST00000518743 NUP214P35658 2090 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 IGKV3D-20A0A0C4DH25 116 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 CENPVL3A0A0U1RRI6 287 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 LINC00854A0A1B0GVQ3 168 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 RAB19A4D1S5 217 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 SYCE1LA8MT33 242 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 F8VZ95 297 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 H3BUX3 64 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 H7C2Y5 167 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 PRMT5O14744 637 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 ACOX3O15254 700 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 PSIP1O75475 530 aaKnown RBP3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 INSP01308 110 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 CLPSP04118 112 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 GLAP06280 429 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 OR8U9P0C7N5 309 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 ZNF14P17017 642 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 RAB3AP20336 220 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 HIST1H1TP22492 207 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 PFN2P35080 140 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 ASIPP42127 132 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 EVX1P49640 407 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 GINS1Q14691 196 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 POU6F1Q14863 301 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 GUCA2BQ16661 112 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 ATP6V1FQ16864 119 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 KHDRBS2Q5VWX1 349 aaKnown RBP3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 RESP18Q5W5W9 173 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 CASP12Q6UXS9 341 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 LRP11Q86VZ4 500 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 UBAC2Q8NBM4 344 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 OR10G4Q8NGN3 311 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 OR10Z1Q8NGY1 313 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 OR8U1Q8NH10 309 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 LRRC45Q96CN5 670 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 NRBF2Q96F24 287 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 RNF145Q96MT1 663 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 NAPGQ99747 312 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 AIF1LQ9BQI0 150 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 SLC25A2Q9BXI2 301 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 ZNF717Q9BY31 904 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 SPNS1Q9H2V7 528 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 RMND1Q9NWS8 449 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 ZNRD1Q9P1U0 126 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 UVRAGQ9P2Y5 699 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 CRCT1Q9UGL9 99 aa3.24□□□□□ -1.89
HMGB1P23-201ENST00000518743 IGHV2OR16-5A0A0B4J2B6 119 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 OR6C70A6NIJ9 312 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 SEC14L6B5MCN3 397 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 ANKRD65E5RJM6 399 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 RFXANKO14593 260 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 MRPL33O75394 65 aaKnown RBP3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 VAPBO95292 243 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 FABP3P05413 133 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 CSNK2A2P19784 350 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 FUT3P21217 361 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 EVI2BP34910 448 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 MAS1LP35410 378 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 CEACAM3P40198 252 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 CEACAM6P40199 344 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 KCNJ3P48549 501 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 P2RX1P51575 399 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 CAV2P51636 162 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 RPS23P62266 143 aaKnown RBP3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 DYNLT1P63172 113 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 SLC35B1P78383 322 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 IL5RAQ01344 420 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 BIKQ13323 160 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 ZSCAN26Q16670 478 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 PLPPR5Q32ZL2 321 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 ACSBG2Q5FVE4 666 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 FAM27D1Q5T7N8 215 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 CBLN2Q8IUK8 224 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 RNF175Q8N4F7 328 aa3.23□□□□□ -1.89
HMGB1P23-201ENST00000518743 NOXO1Q8NFA2 376 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms