RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 A0A1B0GV90 55 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 FAM92AA1XBS5 289 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 A6NDX4 124 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 D6RAR5 112 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 FAAHO00519 579 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 GABRPO00591 440 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 DLEU1O43261 78 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 MBTPS2O43462 519 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 ORC5O43913 435 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 ICOSLGO75144 302 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 GGCTO75223 188 aaKnown RBP2.32□□□□□ -2.04
VPS13B-207ENST00000518569 PTTG1O95997 202 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 DBIP07108 87 aaKnown RBP2.32□□□□□ -2.04
VPS13B-207ENST00000518569 SLC35G6P0C7Q6 338 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 VDAC2P45880 294 aaPredicted RBP2.32□□□□□ -2.04
VPS13B-207ENST00000518569 OR1E2P47887 323 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 LHX2P50458 406 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 CDKN2DP55273 166 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 RPS20P60866 119 aaKnown RBP2.32□□□□□ -2.04
VPS13B-207ENST00000518569 NAA20P61599 178 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 RHOBP62745 196 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 SLC35A2P78381 396 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 SLC35A1P78382 337 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 FMODQ06828 376 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 BIKQ13323 160 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 SURF2Q15527 256 aaPredicted RBP2.32□□□□□ -2.04
VPS13B-207ENST00000518569 OR7A5Q15622 319 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 AVPI1Q5T686 147 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 C1orf195Q5TG92 126 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 LAMTOR1Q6IAA8 161 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 LPCAT3Q6P1A2 487 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 TIFABQ6ZNK6 161 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 FA2HQ7L5A8 372 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 TCF24Q7RTU0 167 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 GLT6D1Q7Z4J2 308 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 MRPL55Q7Z7F7 128 aaKnown RBP2.32□□□□□ -2.04
VPS13B-207ENST00000518569 OAFQ86UD1 273 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 CTAGE3PQ8IX95 158 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 IFT20Q8IY31 132 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 DAW1Q8N136 415 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 CBR4Q8N4T8 237 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 SMIM20Q8N5G0 67 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 ZNF676Q8N7Q3 588 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 SLC35G3Q8N808 338 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 Q8N9W7 124 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 UBAC2Q8NBM4 344 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 NPBQ8NG41 125 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 OR4C13Q8NGP0 309 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 OR1L8Q8NGR8 309 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 OR9A2Q8NGT5 310 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 OR9G1Q8NH87 305 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 NT5CQ8TCD5 201 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 DNAJC19Q96DA6 116 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 PIK3IP1Q96FE7 263 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 ACY3Q96HD9 319 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 FCRL1Q96LA6 429 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 MRPL45Q9BRJ2 306 aaKnown RBP2.32□□□□□ -2.04
VPS13B-207ENST00000518569 MS4A8Q9BY19 250 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 ABCG5Q9H222 651 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 OR51I1Q9H343 314 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 CISHQ9NSE2 258 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 GLS2Q9UI32 602 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 KLK12Q9UKR0 248 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 UTP11Q9Y3A2 253 aaKnown RBP2.32□□□□□ -2.04
VPS13B-207ENST00000518569 KLF12Q9Y4X4 402 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 OR51B2Q9Y5P1 312 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 WSB1Q9Y6I7 421 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 TAF1LQ8IZX4 1826 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 CLUHO75153 1309 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 DHX57Q6P158 1386 aaKnown RBP2.32□□□□□ -2.04
VPS13B-207ENST00000518569 CCDC144AA2RUR9 1427 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 TNS3Q68CZ2 1445 aa2.32□□□□□ -2.04
VPS13B-207ENST00000518569 A0A0C4DFX4 3053 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 DOT1LQ8TEK3 1739 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 ATRXP46100 2492 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 ARFGEF1Q9Y6D6 1849 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 IGLV3-16A0A075B6K0 115 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 TRAV8-4A0A0B4J246 113 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 IGHV3-64DA0A0J9YX35 117 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 FAM159BA6NKW6 160 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 ZNF726A6NNF4 738 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 G3V2T6 193 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 I3L4J1 428 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 M0QYV0 167 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 MFNGO00587 321 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 CYB5BO43169 146 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 RDH16O75452 317 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 SERPINB7O75635 380 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 STK16O75716 305 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 TNFSF15O95150 251 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 FAM107AO95990 144 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 P01737 135 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 IGKV3-11P04433 115 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 IL3P08700 152 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 METTL15P1P0C7V9 234 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 GKN3PP0CG01 181 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 FOLR1P15328 257 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 ZNF32P17041 273 aa2.31□□□□□ -2.04
VPS13B-207ENST00000518569 NELFEP18615 380 aaKnown RBP2.31□□□□□ -2.04
VPS13B-207ENST00000518569 USF1P22415 310 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms