RNA–Protein interactions for RNA: ENST00000517378.1

CDH12-203, Transcript of cadherin 12, humanhuman

TSL 1 (best)

Gene CDH12, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-203ENST00000517378 POLDIP2Q9Y2S7 368 aa5.64□□□□□ -1.51
CDH12-203ENST00000517378 TTC28Q96AY4 2481 aa5.64□□□□□ -1.51
CDH12-203ENST00000517378 FREM1Q5H8C1 2179 aa5.64□□□□□ -1.51
CDH12-203ENST00000517378 A0A1W2PR80 420 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 ARGFXA6NJG6 315 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 RNF212BA8MTL3 300 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 C21orf140B9A014 251 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 CLDN34H7C241 214 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 ZNHIT1O43257 154 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 YIF1AO95070 293 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 OR2H2O95918 312 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 CLN3Q13286 438 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 ZNF674Q2M3X9 581 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 PYY3Q5JQD4 70 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 FAM209BQ5JX69 171 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 C1orf87Q8N0U7 546 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 ZBTB34Q8NCN2 500 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 HES7Q9BYE0 225 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 VSIRQ9H7M9 311 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 ZNF665Q9H7R5 613 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 GAR1Q9NY12 217 aaKnown RBP5.63□□□□□ -1.51
CDH12-203ENST00000517378 C9orf172C9J069 976 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 CYB5BO43169 146 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 GATCO43716 136 aaKnown RBP5.63□□□□□ -1.51
CDH12-203ENST00000517378 MT-CO3P00414 261 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 IFNA1P01562 189 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 OPN1MWP04001 364 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 METTL15P1P0C7V9 234 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 PGA5P0DJD9 388 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 OPN1MW2P0DN77 364 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 OPN1MW3P0DN78 364 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 CA6P23280 308 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 CEBPGP53567 150 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 CD81P60033 236 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 RAB11AP62491 216 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 IZUMO4Q1ZYL8 232 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 WDR25Q64LD2 544 aaPredicted RBP5.63□□□□□ -1.51
CDH12-203ENST00000517378 SLC25A24Q6NUK1 477 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 HIST3H2BBQ8N257 126 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 DRAM1Q8N682 238 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 MDS2Q8NDY4 140 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 RNASE11Q8TAA1 199 aaKnown RBP5.63□□□□□ -1.51
CDH12-203ENST00000517378 CDH20Q9HBT6 801 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 HES4Q9HCC6 221 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 HSPB7Q9UBY9 170 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 ESPL1Q14674 2120 aa5.63□□□□□ -1.51
CDH12-203ENST00000517378 ZNF729A6NN14 1252 aaPredicted RBP5.62□□□□□ -1.51
CDH12-203ENST00000517378 FAM166BA8MTA8 275 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 LAMTOR5O43504 91 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 IAPPP10997 89 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 S100A2P29034 98 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 NDUFA6P56556 154 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 GABRA6Q16445 453 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 FBXW9Q5XUX1 488 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 SPNS3Q6ZMD2 512 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 P4HA3Q7Z4N8 544 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 MDP1Q86V88 176 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 LILRB2Q8N423 598 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 SCCPDHQ8NBX0 429 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 IL1F10Q8WWZ1 152 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 TAF15Q92804 592 aaKnown RBP eCLIP5.62□□□□□ -1.51
CDH12-203ENST00000517378 FAM210BQ96KR6 192 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 PYGO2Q9BRQ0 406 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 PRSS50Q9UI38 385 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 PPP1R3CQ9UQK1 317 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 TRAV20A0A0B4J274 112 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 MAP1LC3B2A6NCE7 125 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 ZFP92A6NM28 416 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 SMPD2O60906 423 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 PTBP3O95758 552 aaKnown RBP5.62□□□□□ -1.51
CDH12-203ENST00000517378 TRGC2P03986 189 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 TNFRSF9Q07011 255 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 SLC38A11Q08AI6 406 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 TBC1D28Q2M2D7 210 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 VWC2Q2TAL6 325 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 ZNF766Q5HY98 468 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 DCAF10Q5QP82 559 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 OR2T2Q6IF00 324 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 CYP2G1PQ6ZSU1 146 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 ZNF645Q8N7E2 425 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 TMEM105Q8N8V8 129 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 OR4C12Q96R67 309 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 MRPL37Q9BZE1 423 aaKnown RBP5.62□□□□□ -1.51
CDH12-203ENST00000517378 MAP1LC3BQ9GZQ8 125 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 TRAPPC2LQ9UL33 140 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 URGCP-MRPS24S4R325 110 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 BDP1A6H8Y1 2624 aa5.62□□□□□ -1.51
CDH12-203ENST00000517378 TMEM210A6NLX4 147 aa5.61□□□□□ -1.51
CDH12-203ENST00000517378 IQCF6A8MYZ5 107 aa5.61□□□□□ -1.51
CDH12-203ENST00000517378 TMEM250H0YL14 139 aa5.61□□□□□ -1.51
CDH12-203ENST00000517378 PPP1R2P9O14990 202 aa5.61□□□□□ -1.51
CDH12-203ENST00000517378 ATXN7O15265 892 aaPredicted RBP5.61□□□□□ -1.51
CDH12-203ENST00000517378 WISP2O76076 250 aa5.61□□□□□ -1.51
CDH12-203ENST00000517378 SOD3P08294 240 aa5.61□□□□□ -1.51
CDH12-203ENST00000517378 NKX6-1P78426 367 aaPredicted RBP5.61□□□□□ -1.51
CDH12-203ENST00000517378 ATP6V1FQ16864 119 aa5.61□□□□□ -1.51
CDH12-203ENST00000517378 LCN15Q6UWW0 184 aa5.61□□□□□ -1.51
CDH12-203ENST00000517378 MCEMP1Q8IX19 187 aa5.61□□□□□ -1.51
CDH12-203ENST00000517378 FGFRL1Q8N441 504 aa5.61□□□□□ -1.51
CDH12-203ENST00000517378 TCTEX1D1Q8N7M0 179 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms