RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 NOS1P29475 1434 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 IGKV6-21A0A0C4DH24 114 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 KNCNA6PVL3 124 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 SLC17A3O00476 420 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 PI15O43692 258 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 SLC37A4O43826 429 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 ORC5O43913 435 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 CCNKO75909 580 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 IGLV2-23P01705 113 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 HSPB1P04792 205 aaKnown RBP2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 SERPINE1P05121 402 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 CPMP14384 443 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 GABRR1P24046 479 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 ERP29P30040 261 aaKnown RBP2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 ACVRL1P37023 503 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 NMUP48645 174 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 PSMB3P49720 205 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 DEFA3P59666 94 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 CDC42P60953 191 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 BTN1A1Q13410 526 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 KRTAP15-1Q3LI76 137 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 MPV17L2Q567V2 206 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 FA2HQ7L5A8 372 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 MARCH3Q86UD3 253 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 ZNF429Q86V71 674 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 OR8J3Q8NGG0 315 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 OR10G4Q8NGN3 311 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 OR51H1Q8NH63 302 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 ROPN1LQ96C74 230 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 PYURFQ96I23 114 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 DNAJC30Q96LL9 226 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 SEC22CQ9BRL7 303 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 ZNF649Q9BS31 505 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 EFCAB11Q9BUY7 163 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 MS4A8Q9BY19 250 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 CCDC90BQ9GZT6 254 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 ZNF696Q9H7X3 374 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 SCRT2Q9NQ03 307 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 PRTFDC1Q9NRG1 225 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 CA10Q9NS85 328 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 LYRM2Q9NU23 88 aaPredicted RBP2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 ANAPC10Q9UM13 185 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 SSR3Q9UNL2 185 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 MOB4Q9Y3A3 225 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 FIS1Q9Y3D6 152 aa2.88□□□□□ -1.95
RNU4-60P-201ENST00000517239 ATRNO75882 1429 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 DOCK3Q8IZD9 2030 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 TMED7-TICAM2A0A0A6YYA0 188 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 C4orf51C9J302 202 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 E7EQ34 232 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 TMEM250H0YL14 139 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 M0R381 172 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 CDRT1O95170 752 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 HLA-DRB1P01911 266 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 SEC11BP0C7V7 166 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 CRISP2P16562 243 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 SPI1P17947 270 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 THBS3P49746 956 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 CCR6P51684 374 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 RPS20P60866 119 aaKnown RBP2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 NCALDP61601 193 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 RPL36AP83881 106 aaKnown RBP2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 DAZ2Q13117 558 aaKnown RBP2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 RHEBQ15382 184 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 NDUFA5Q16718 116 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 TMEM241Q24JQ0 296 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 DEFB115Q30KQ5 88 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 HES3Q5TGS1 186 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 LYPD2Q6UXB3 125 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 TOMM20LQ6UXN7 152 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 DAZ4Q86SG3 579 aaKnown RBP2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 PDPNQ86YL7 162 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 LRRC18Q8N456 261 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 YIPF7Q8N8F6 280 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 GDPD1Q8N9F7 314 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 DCAF4L2Q8NA75 395 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 C20orf203Q8NBC4 194 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 OR11H6Q8NGC7 330 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 FAM57AQ8TBR7 257 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 FAM104AQ969W3 186 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 GALMQ96C23 342 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 TMEM101Q96IK0 257 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 DERL3Q96Q80 235 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 THTPAQ9BU02 230 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 FGF23Q9GZV9 251 aaPredicted RBP2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 TMEM222Q9H0R3 208 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 GTSF1LQ9H1H1 148 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 MED28Q9H204 178 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 CXorf21Q9HAI6 301 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 DAZ1Q9NQZ3 744 aaKnown RBP2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 DAZ3Q9NR90 486 aaKnown RBP2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 SPANXA1Q9NS26 97 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 ACER3Q9NUN7 267 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 DNAJC12Q9UKB3 198 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 NEU3Q9UQ49 428 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 NUBP2Q9Y5Y2 271 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 ADAMTSL1Q8N6G6 1762 aa2.87□□□□□ -1.95
RNU4-60P-201ENST00000517239 ZCCHC11Q5TAX3 1644 aaKnown RBP2.86□□□□□ -1.95
RNU4-60P-201ENST00000517239 CD109Q6YHK3 1445 aa2.86□□□□□ -1.95
RNU4-60P-201ENST00000517239 hCG_1818297A0A087WSY0 165 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 1836.7 ms