RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	JTB	O76095	146 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	IGLV1-51	P01701	117 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	IGHV3-11	P01762	117 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	NDP	Q00604	133 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	TMEM267	Q0VDI3	215 aa	Predicted RBP	12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	RAB40B	Q12829	278 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	GNMT	Q14749	295 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	ZIK1	Q3SY52	487 aa	Predicted RBP	12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	ZNF833P	Q6ZTB9	187 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	ANKRD13B	Q86YJ7	626 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	OR52L2P	Q8NGH6	319 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	MRPS24	Q96EL2	167 aa	Known RBP	12.1	□□□□□ -0.47
LMNA-223	ENST00000515459		Q96MT0	163 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	AMBN	Q9NP70	447 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	KCNIP1	Q9NZI2	227 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	JPT1	Q9UK76	154 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	GMPPB	Q9Y5P6	360 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	PEX16	Q9Y5Y5	336 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	A3GALT2	U3KPV4	340 aa		12.1	□□□□□ -0.47
LMNA-223	ENST00000515459	SC5D	O75845	299 aa		12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	IFNA6	P05013	189 aa		12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	GABRB1	P18505	474 aa		12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	CX3CL1	P78423	397 aa		12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	RIPK1	Q13546	671 aa		12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	LRRC36	Q1X8D7	754 aa		12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	CCDC58	Q4VC31	144 aa		12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	RPL22L1	Q6P5R6	122 aa	Known RBP	12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	ZNF554	Q86TJ5	538 aa		12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	OR52I1	Q8NGK6	324 aa		12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	ABHD5	Q8WTS1	349 aa		12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	ORAI1	Q96D31	301 aa		12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	RSRP1	Q9BUV0	290 aa		12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	MBNL3	Q9NUK0	354 aa	Known RBP	12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	RNF150	Q9ULK6	438 aa		12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	NUBP2	Q9Y5Y2	271 aa		12.09	□□□□□ -0.47
LMNA-223	ENST00000515459	SAA2-SAA4	A0A096LPE2	208 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	EI24	O14681	340 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	YPEL1	O60688	119 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	RGS11	O94810	467 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	SAA2	P0DJI9	122 aa	Predicted RBP	12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	ARSB	P15848	533 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	CD40LG	P29965	261 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	PPP1CC	P36873	323 aa	Known RBP	12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	OR3A3	P47888	321 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	TPPP2	P59282	170 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	HTD2	P86397	168 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	PLGLA	Q15195	96 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	HAGH	Q16775	308 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	ACTBL2	Q562R1	376 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	XAF1	Q6GPH4	301 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	CD200R1L	Q6Q8B3	271 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	MS4A10	Q96PG2	267 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	YPEL2	Q96QA6	119 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	FBXL15	Q9H469	300 aa		12.08	□□□□□ -0.48
LMNA-223	ENST00000515459	UBE2QL1	A1L167	161 aa		12.07	□□□□□ -0.48
LMNA-223	ENST00000515459	RRH	O14718	337 aa		12.07	□□□□□ -0.48
LMNA-223	ENST00000515459	LIMS3	P0CW19	117 aa		12.07	□□□□□ -0.48
LMNA-223	ENST00000515459	LIMS4	P0CW20	117 aa		12.07	□□□□□ -0.48
LMNA-223	ENST00000515459	EGR2	P11161	476 aa	Predicted RBP	12.07	□□□□□ -0.48
LMNA-223	ENST00000515459	IGFBP3	P17936	291 aa	Predicted RBP	12.07	□□□□□ -0.48
LMNA-223	ENST00000515459	AKIRIN2	Q53H80	203 aa		12.07	□□□□□ -0.48
LMNA-223	ENST00000515459	LY6G6F	Q5SQ64	297 aa		12.07	□□□□□ -0.48
LMNA-223	ENST00000515459	UNQ5815/PRO19632	Q6UWF5	114 aa		12.07	□□□□□ -0.48
LMNA-223	ENST00000515459	GLIPR1L1	Q6UWM5	242 aa		12.07	□□□□□ -0.48
LMNA-223	ENST00000515459	PPP1R27	Q86WC6	154 aa		12.07	□□□□□ -0.48
LMNA-223	ENST00000515459	OR2AK2	Q8NG84	335 aa		12.07	□□□□□ -0.48
LMNA-223	ENST00000515459	RHOV	Q96L33	236 aa		12.07	□□□□□ -0.48
LMNA-223	ENST00000515459	SLA2	Q9H6Q3	261 aa		12.07	□□□□□ -0.48
LMNA-223	ENST00000515459	CKLF	Q9UBR5	152 aa		12.07	□□□□□ -0.48
LMNA-223	ENST00000515459	FAM90A7P	A6NKC0	464 aa		12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	FAM90A23P	A8MXZ1	464 aa		12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	MAS1	P04201	325 aa		12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	GLA	P06280	429 aa		12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	FUT3	P21217	361 aa		12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	ALDH3A2	P51648	485 aa		12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	FAM71F2	Q6NXP2	309 aa		12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	FAM131A	Q6UXB0	335 aa		12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	C5orf24	Q7Z6I8	188 aa		12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	RHOXF1	Q8NHV9	184 aa		12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	IL17D	Q8TAD2	202 aa		12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	MUL1	Q969V5	352 aa		12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	GALM	Q96C23	342 aa		12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	FAM103A1	Q9BTL3	118 aa	Known RBP	12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	SELENOI	Q9C0D9	397 aa		12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	MRPS18A	Q9NVS2	196 aa	Known RBP	12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	CNOT2	Q9NZN8	540 aa	Known RBP	12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	RPL36	Q9Y3U8	105 aa	Known RBP	12.06	□□□□□ -0.48
LMNA-223	ENST00000515459	OR5H14	A6NHG9	310 aa		12.05	□□□□□ -0.48
LMNA-223	ENST00000515459		H0Y980	276 aa		12.05	□□□□□ -0.48
LMNA-223	ENST00000515459	FCN1	O00602	326 aa		12.05	□□□□□ -0.48
LMNA-223	ENST00000515459	GPX5	O75715	221 aa		12.05	□□□□□ -0.48
LMNA-223	ENST00000515459	TRGV3	P03979	118 aa		12.05	□□□□□ -0.48
LMNA-223	ENST00000515459	MGMT	P16455	207 aa		12.05	□□□□□ -0.48
LMNA-223	ENST00000515459	ZP3	P21754	424 aa		12.05	□□□□□ -0.48
LMNA-223	ENST00000515459	RASSF2	P50749	326 aa		12.05	□□□□□ -0.48
LMNA-223	ENST00000515459	AWAT2	Q6E213	333 aa		12.05	□□□□□ -0.48
LMNA-223	ENST00000515459	JAGN1	Q8N5M9	183 aa		12.05	□□□□□ -0.48
LMNA-223	ENST00000515459	LFNG	Q8NES3	379 aa		12.05	□□□□□ -0.48
LMNA-223	ENST00000515459	OR13C5	Q8NGS8	318 aa		12.05	□□□□□ -0.48
LMNA-223	ENST00000515459	MRPL30	Q8TCC3	161 aa	Known RBP	12.05	□□□□□ -0.48

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms