RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 TAAR5O14804 337 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 DNASE1L1P49184 302 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 MFGE8Q08431 387 aaPredicted RBP6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 PEAR1Q5VY43 1037 aaPredicted RBP6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 CST9LP1Q5W188 147 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 MDGA2Q7Z553 956 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 SPEM1Q8N4L4 309 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 OR8S1Q8NH09 359 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 ZNF417Q8TAU3 575 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 RNF125Q96EQ8 232 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 C19orf24Q9BVV8 132 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 UBTD1Q9HAC8 227 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 MRPL16Q9NX20 251 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 CDC42EP3Q9UKI2 254 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 KIAA1549Q9HCM3 1950 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 CNTRLQ7Z7A1 2325 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 GAGE12HA6NDE8 117 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 MS4A18H0YCH9 400 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 HYPMO75409 117 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 FBXW4P57775 412 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 TAS2R20P59543 309 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 ROM1Q03395 351 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 MS4A18Q3C1V0 323 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 ZNF260Q3ZCT1 412 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 FAM166AQ6J272 317 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 ANKRD37Q7Z713 158 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 FCAMRQ8WWV6 532 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 PIGTQ969N2 578 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 PARP12Q9H0J9 701 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 MRPS17Q9Y2R5 130 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 ETV7Q9Y603 341 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 TMEM14AQ9Y6G1 99 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 RALGAPA1Q6GYQ0 2036 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 COL27A1Q8IZC6 1860 aaPredicted RBP6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 A0A1B0GUS0 222 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 SLC16A7O60669 478 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 CD33P20138 364 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 SULT1A2P50226 295 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 EFNB2P52799 333 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 SRSF1Q07955 248 aaKnown RBP eCLIP6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 CSRP2Q16527 193 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 LRRC10Q5BKY1 277 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 PAQR4Q8N4S7 273 aaPredicted RBP6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 RNF128Q8TEB7 428 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 CLDN23Q96B33 292 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 S100A16Q96FQ6 103 aaKnown RBP6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 RSG1Q9BU20 258 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 ELOVL3Q9HB03 270 aa6.43□□□□□ -1.38
PDLIM5-219ENST00000514743 ASCC3Q8N3C0 2202 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 CABIN1Q9Y6J0 2220 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 IGKV1D-43A0A0B4J1Z2 117 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 LILRA1O75019 489 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 DUS4LO95620 317 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 HLA-DQA2P01906 255 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 F2RP25116 425 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 FAUP35544 74 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 PSG9Q00887 426 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 MPV17LQ2QL34 196 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 ZNF101Q8IZC7 436 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 LGI3Q8N145 548 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 ZNF676Q8N7Q3 588 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 LYPD6BQ8NI32 183 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 CYTL1Q9NRR1 136 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 TMEM106BQ9NUM4 274 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 B3GALT1Q9Y5Z6 326 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 A0A1W2PQM1 296 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 GAGE10A6NGK3 116 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 B4DEV8 164 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 PTGDSP41222 190 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 SLC35A1P78382 337 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 RPL24P83731 157 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 TNXAQ16473 311 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 MRPL23Q16540 153 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 OR5A2Q8NGI9 324 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 OR10S1Q8NGN2 331 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 SNIP1Q8TAD8 396 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 TMEM37Q8WXS4 190 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 PSMF1Q92530 271 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 TMEM160Q9NX00 188 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 ZNF581Q9P0T4 197 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 TRAPPC2LQ9UL33 140 aa6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 NOP16Q9Y3C1 178 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-219ENST00000514743 A0A0G2JMM0 328 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 A0A1W2PPB8 328 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 KIR3DP1A8MWS1 328 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 H0YL77 283 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 ETV2O00321 342 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 TAX1BP3O14907 124 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 EFNA2O43921 213 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 IGLC1P0CG04 106 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 SMIM17P0DL12 118 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 IGLC2P0DOY2 106 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 IGLC3P0DOY3 106 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 IGFBP3P17936 291 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 SRD5A2P31213 254 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 CDKN1AP38936 164 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 PAX9P55771 341 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 FMODQ06828 376 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 HIST3H3Q16695 136 aa6.41□□□□□ -1.38
PDLIM5-219ENST00000514743 PCK2Q16822 640 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms