RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 RBMXL1Q96E39 390 aaKnown RBP8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 YPEL2Q96QA6 119 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 HSPB9Q9BQS6 159 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 ZFP57Q9NU63 452 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 ZNF580Q9UK33 172 aa8.23□□□□□ -1.09
HMGXB3-205ENST00000514469 SLC17A2O00624 439 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 RGS11O94810 467 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 HSMCR30P0CW71 290 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 CPEP16870 476 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 PSMA1P25786 263 aaKnown RBP8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 THBS3P49746 956 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 TRAM1Q15629 374 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 TEX38Q6PEX7 206 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 ZNF833PQ6ZTB9 187 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 C8orf86Q6ZUL3 223 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 MOB1BQ7L9L4 216 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 PRSS48Q7RTY5 328 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 RNF152Q8N8N0 203 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 TMEM203Q969S6 136 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 GALMQ96C23 342 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 RASL11BQ9BPW5 248 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 NABP2Q9BQ15 211 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 FAAP24Q9BTP7 215 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 GON7Q9BXV9 100 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 MRPL20Q9BYC9 149 aaKnown RBP8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 LPAR5Q9H1C0 372 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 IFI27L2Q9H2X8 130 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 LRRC42Q9Y546 428 aa8.22□□□□□ -1.09
HMGXB3-205ENST00000514469 SAA2-SAA4A0A096LPE2 208 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 TRBV6-6A0A0A6YYG2 114 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 FOXI3A8MTJ6 420 aaPredicted RBP8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 NUDT19A8MXV4 375 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 RRP9O43818 475 aaKnown RBP8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 ARL6IP5O75915 188 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 IGF1P05019 195 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 SAA2P0DJI9 122 aaPredicted RBP8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 ARSBP15848 533 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 BLVRBP30043 206 aaPredicted RBP8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 SOX6P35712 828 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 OR3A3P47888 321 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 HSPA13P48723 471 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 EGFEM1PQ0D2K5 195 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 FOXE3Q13461 319 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 P2RY14Q15391 338 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 MMDQ15546 238 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 PNLIPRP3Q17RR3 467 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 FAM71F2Q6NXP2 309 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 ZNF695Q8IW36 515 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 FAM89BQ8N5H3 189 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 KLHL30-AS1Q8NEE0 82 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 OR2AK2Q8NG84 335 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 P2RX4Q99571 388 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 VCX3BQ9H321 246 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 PLGRKTQ9HBL7 147 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 ABRACLQ9P1F3 81 aa8.21□□□□□ -1.1
HMGXB3-205ENST00000514469 SOCS1O15524 211 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 IGHG4P01861 327 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 RPLP1P05386 114 aaKnown RBP8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 ELANEP08246 267 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 CALRP27797 417 aaKnown RBP8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 MYCNOSP40205 109 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 MAP2K4P45985 399 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 KRTAP10-11P60412 298 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 ACTBP60709 375 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 HLA-DRB3P79483 266 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 FABP5Q01469 135 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 TBCEQ15813 527 aaPredicted RBP8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 RAB11BQ15907 218 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 CXorf66Q5JRM2 361 aaPredicted RBP8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 IZUMO2Q6UXV1 221 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 IL1F10Q8WWZ1 152 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 MGLLQ99685 303 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 ZNF251Q9BRH9 671 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 URM1Q9BTM9 101 aaKnown RBP8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 GPR61Q9BZJ8 451 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 CCDC90BQ9GZT6 254 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 RIMS4Q9H426 269 aaPredicted RBP8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 CHMP1AQ9HD42 196 aaPredicted RBP8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 PLEKHJ1Q9NW61 149 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 STEAP1Q9UHE8 339 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 ZNF107Q9UII5 783 aaPredicted RBP8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 AK3Q9UIJ7 227 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 HSF4Q9ULV5 492 aa8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 AK6Q9Y3D8 172 aaKnown RBP8.2□□□□□ -1.1
HMGXB3-205ENST00000514469 K7EIL1 84 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 ITGB1BP1O14713 200 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 LDLRAD4O15165 306 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 NBR2O15453 112 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 ST8SIA5O15466 376 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 NDUFA3O95167 84 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 HLA-DRB1P01911 266 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 SLC2A2P11168 524 aaPredicted RBP8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 VDAC1P21796 283 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 CNTFRP26992 372 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 CDX1P47902 265 aaPredicted RBP8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 LCNL1Q6ZST4 164 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 ZNF367Q7RTV3 350 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 NPBQ8NG41 125 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 OR8U1Q8NH10 309 aa8.19□□□□□ -1.1
HMGXB3-205ENST00000514469 MYOZ3Q8TDC0 251 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms