RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 DEDDO75618 318 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 RLN2P04090 185 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 MMP9P14780 707 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 VDAC1P21796 283 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 S100A1P23297 94 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 CD80P33681 288 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 NUP62P37198 522 aaPredicted RBP6.97□□□□□ -1.29
RNF4-220ENST00000513578 UBA52P62987 128 aaKnown RBP6.97□□□□□ -1.29
RNF4-220ENST00000513578 RAB32Q13637 225 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 EXOSC2Q13868 293 aaKnown RBP6.97□□□□□ -1.29
RNF4-220ENST00000513578 LRRC37A5PQ49AS3 106 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 C4orf17Q53FE4 359 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 NMSQ5H8A3 153 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 TMEM268Q5VZI3 342 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 LYZL2Q7Z4W2 148 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 ZNF695Q8IW36 515 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 DRAM1Q8N682 238 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 SLC35G3Q8N808 338 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 GALNT11Q8NCW6 608 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 OR10A7Q8NGE5 316 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 OR4D5Q8NGN0 318 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 OR1L1Q8NH94 360 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 MRGPRDQ8TDS7 321 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 SCARB1Q8WTV0 552 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 CA5BP1Q8WTZ4 195 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 IL1F10Q8WWZ1 152 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 EDARADDQ8WWZ3 215 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 RBPMSQ93062 196 aaKnown RBP6.97□□□□□ -1.29
RNF4-220ENST00000513578 ARL11Q969Q4 196 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 PHYHIPLQ96FC7 376 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 GAFA1Q96PS6 74 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 YPEL2Q96QA6 119 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 GSX2Q9BZM3 304 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 PLEKHF2Q9H8W4 249 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 PLEKHA2Q9HB19 425 aa6.97□□□□□ -1.29
RNF4-220ENST00000513578 LIN7CQ9NUP9 197 aaKnown RBP6.97□□□□□ -1.29
RNF4-220ENST00000513578 PPIAL4EA0A075B759 164 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 IGHV3OR15-7A0A075B7D8 119 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 RPS10-NUDT3A0A1W2PQS6 291 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 LINC00862A6NCI5 91 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 NKX2-6A6NCS4 301 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 NKX6-3A6NJ46 265 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 ZNF729A6NN14 1252 aaPredicted RBP6.96□□□□□ -1.3
RNF4-220ENST00000513578 DEFB108AA8MXU0 73 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 E5RGE8 158 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 PPIAL4DF5H284 164 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 TMEM178BH3BS89 294 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 ATXN7O15265 892 aaPredicted RBP6.96□□□□□ -1.3
RNF4-220ENST00000513578 NDUFA2O43678 99 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 CYB5R3P00387 301 aaPredicted RBP6.96□□□□□ -1.3
RNF4-220ENST00000513578 CFDP00746 253 aaPredicted RBP6.96□□□□□ -1.3
RNF4-220ENST00000513578 PPIAL4FP0DN26 164 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 HTR2BP41595 481 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 PPOXP50336 477 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 AP2S1P53680 142 aaPredicted RBP6.96□□□□□ -1.3
RNF4-220ENST00000513578 HOXA4Q00056 320 aaPredicted RBP6.96□□□□□ -1.3
RNF4-220ENST00000513578 MEF2CQ06413 473 aaPredicted RBP6.96□□□□□ -1.3
RNF4-220ENST00000513578 SMCO1Q147U7 214 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 ZNF672Q499Z4 452 aaPredicted RBP6.96□□□□□ -1.3
RNF4-220ENST00000513578 ZNF66Q6ZN08 573 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 BOLLQ8N9W6 283 aaKnown RBP6.96□□□□□ -1.3
RNF4-220ENST00000513578 OR52M1Q8NGK5 317 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 OR1S1Q8NH92 325 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 STOML3Q8TAV4 291 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 LINC01560Q8TB33 94 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 DCUN1D4Q92564 292 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 NINJ1Q92982 152 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 FAM210AQ96ND0 272 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 ARPC5LQ9BPX5 153 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 C11orf1Q9H5F2 150 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 SAP30LQ9HAJ7 183 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 MED9Q9NWA0 146 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 CISD1Q9NZ45 108 aaKnown RBP6.96□□□□□ -1.3
RNF4-220ENST00000513578 OR5AC2Q9NZP5 309 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 KAAG1Q9UBP8 84 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 NSG2Q9Y328 171 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 PPIAL4AQ9Y536 164 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 AUP1Q9Y679 476 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 POMT1Q9Y6A1 747 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 ATMQ13315 3056 aa6.96□□□□□ -1.3
RNF4-220ENST00000513578 KBTBD11-OT1A0A1B0GTJ5 212 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 A0A1B0GU03 582 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 K7EPK0 472 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 ST8SIA3O43173 380 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 SIAH2O43255 324 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 PITX3O75364 302 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 MBPP02686 304 aaPredicted RBP6.95□□□□□ -1.3
RNF4-220ENST00000513578 TFF1P04155 84 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 OR8U9P0C7N5 309 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 HKR1P10072 659 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 P2RY1P47900 373 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 LOXL3P58215 753 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 CCL8P80075 99 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 ID3Q02535 119 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 CATR1Q13166 79 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 Q3ZCU0 254 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 MORN2Q502X0 79 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 GPR157Q5UAW9 335 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 PRR18Q8N4B5 295 aa6.95□□□□□ -1.3
RNF4-220ENST00000513578 FAM71E2Q8N5Q1 922 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms