RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 SLC45A2Q9UMX9 530 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 GBF1Q92538 1859 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 PSME4Q14997 1843 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 SPAARA0A1B0GVQ0 90 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 HPRT1P00492 218 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 ZNF735P0CB33 412 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 RNPS1Q15287 305 aaKnown RBP9.78□□□□□ -0.84
TCOF1-211ENST00000513346 ZNF646O15015 1829 aaPredicted RBP9.78□□□□□ -0.84
TCOF1-211ENST00000513346 IGHV5-10-1A0A0J9YXX1 117 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 HIST3H3Q16695 136 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 SPATA46Q5T0L3 261 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 S100A7AQ86SG5 101 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 OR10D3Q8NH80 312 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 ATRXP46100 2492 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 TEX50A0A1B0GTY4 177 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 TBX6O95947 436 aaPredicted RBP9.78□□□□□ -0.84
TCOF1-211ENST00000513346 SOD3P08294 240 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 FGF5P12034 268 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 LTBRP36941 435 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 CEACAM6P40199 344 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 MISP3Q96FF7 219 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 RTTNQ86VV8 2226 aa9.78□□□□□ -0.84
TCOF1-211ENST00000513346 FCER1GP30273 86 aa9.77□□□□□ -0.84
TCOF1-211ENST00000513346 TCL1AP56279 114 aa9.77□□□□□ -0.84
TCOF1-211ENST00000513346 TMEM187Q14656 261 aa9.77□□□□□ -0.84
TCOF1-211ENST00000513346 ZNF774Q6NX45 483 aa9.77□□□□□ -0.84
TCOF1-211ENST00000513346 LIPT2A6NK58 231 aa9.77□□□□□ -0.85
TCOF1-211ENST00000513346 PRR33A8MZF0 331 aa9.77□□□□□ -0.85
TCOF1-211ENST00000513346 KBTBD11O94819 623 aa9.77□□□□□ -0.85
TCOF1-211ENST00000513346 UBALD1Q8TB05 177 aa9.77□□□□□ -0.85
TCOF1-211ENST00000513346 HIST1H2BLQ99880 126 aa9.77□□□□□ -0.85
TCOF1-211ENST00000513346 G6PC2Q9NQR9 355 aa9.77□□□□□ -0.85
TCOF1-211ENST00000513346 CYTL1Q9NRR1 136 aa9.77□□□□□ -0.85
TCOF1-211ENST00000513346 POLEQ07864 2286 aa9.77□□□□□ -0.85
TCOF1-211ENST00000513346 K7EQM0 130 aa9.77□□□□□ -0.85
TCOF1-211ENST00000513346 IFI6P09912 130 aa9.77□□□□□ -0.85
TCOF1-211ENST00000513346 GALNSP34059 522 aa9.77□□□□□ -0.85
TCOF1-211ENST00000513346 PMCHL1Q16048 86 aa9.77□□□□□ -0.85
TCOF1-211ENST00000513346 FA2HQ7L5A8 372 aa9.77□□□□□ -0.85
TCOF1-211ENST00000513346 EDARADDQ8WWZ3 215 aa9.77□□□□□ -0.85
TCOF1-211ENST00000513346 C21orf140B9A014 251 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 IGHV2-70P01814 119 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 MT-ND6P03923 174 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 SNRPCP09234 159 aaKnown RBP9.76□□□□□ -0.85
TCOF1-211ENST00000513346 Q56UQ5 140 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 FHL5Q5TD97 284 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 SPINK14Q6IE38 97 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 TGIF2LYQ8IUE0 185 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 MRGPRFQ96AM1 343 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 KLF2Q9Y5W3 355 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-211ENST00000513346 RLFQ13129 1914 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 IGKV1D-42A0A075B6H8 117 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 TRBV6-7A0A0A0MS04 114 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 PMELP40967 661 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 UNC119Q13432 240 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 PIGYQ3MUY2 71 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-211ENST00000513346 CRIPAKQ8N1N5 446 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 OR4X1Q8NH49 305 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 TM4SF19Q96DZ7 209 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 MARS2Q96GW9 593 aaKnown RBP9.76□□□□□ -0.85
TCOF1-211ENST00000513346 S1PR3Q99500 378 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 RTBDNQ9BSG5 229 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-211ENST00000513346 FOXS1O43638 330 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 CA11O75493 328 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 MRPL54Q6P161 138 aaKnown RBP9.76□□□□□ -0.85
TCOF1-211ENST00000513346 BEND2Q8NDZ0 799 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 FGF11Q92914 225 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 MOB3AQ96BX8 217 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 ZNF71Q9NQZ8 489 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-211ENST00000513346 ZNF32P17041 273 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 CAMPP49913 170 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 TMEM251Q8N6I4 163 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 OR2D3Q8NGH3 330 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 RBKSQ9H477 322 aa9.76□□□□□ -0.85
TCOF1-211ENST00000513346 OTOFQ9HC10 1997 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 MPZP25189 248 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 SUB1P53999 127 aaKnown RBP eCLIP9.75□□□□□ -0.85
TCOF1-211ENST00000513346 GNG3P63215 75 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 SLC22A18ASQ8N1D0 253 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 CACNA1AO00555 2505 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 SCN2AQ99250 2005 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 LRRC3CA6NJW4 275 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 TMEM250H0YL14 139 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 BMPR1BO00238 502 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 NDUFB4O95168 129 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 ZP4Q12836 540 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 PRDX4Q13162 271 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 CSRP2Q16527 193 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 GFI1BQ5VTD9 330 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 WDFY1Q8IWB7 410 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 SH2D2AQ9NP31 389 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 OR2W1Q9Y3N9 320 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 FAM157CP0CG43 387 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 BPIFB3P59826 476 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 NHLH1Q02575 133 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 SAPCD1Q5SSQ6 148 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 ZCCHC14Q8WYQ9 949 aaKnown RBP9.75□□□□□ -0.85
TCOF1-211ENST00000513346 MIEN1Q9BRT3 115 aa9.75□□□□□ -0.85
TCOF1-211ENST00000513346 OR2J1Q9GZK6 312 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms