RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 DIRC3C9JPN6 131 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 GDF9O60383 454 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 SRSF10O75494 262 aaKnown RBP7.76□□□□□ -1.17
VCAN-208ENST00000512590 CD37P11049 281 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 LRRC75AQ8NAA5 344 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 PLAC1Q9HBJ0 212 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 BCL2L10Q9HD36 194 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 A0A1W2PQM1 296 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 PSPNO60542 156 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 DUSP14O95147 198 aaKnown RBP7.76□□□□□ -1.17
VCAN-208ENST00000512590 PNLIPP16233 465 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 PSMB6P28072 239 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 FAM122BQ7Z309 247 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 MRPL20Q9BYC9 149 aaKnown RBP7.76□□□□□ -1.17
VCAN-208ENST00000512590 RNF122Q9H9V4 155 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 RPRMQ9NS64 109 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 TMEFF2Q9UIK5 374 aaPredicted RBP7.76□□□□□ -1.17
VCAN-208ENST00000512590 SIRT4Q9Y6E7 314 aaPredicted RBP7.76□□□□□ -1.17
VCAN-208ENST00000512590 HMGA1P17096 107 aaKnown RBP7.76□□□□□ -1.17
VCAN-208ENST00000512590 COTL1Q14019 142 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 LDLRAD3Q86YD5 345 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 TMEM86BQ8N661 226 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 NUBPLQ8TB37 319 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 ATP5LO75964 103 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 KBTBD11O94819 623 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 CELA2BP08218 269 aaPredicted RBP7.76□□□□□ -1.17
VCAN-208ENST00000512590 CCR2P41597 374 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 RPL29P47914 159 aaKnown RBP7.76□□□□□ -1.17
VCAN-208ENST00000512590 TMEM241Q24JQ0 296 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 LRP11Q86VZ4 500 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 MGST3O14880 152 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 COMPP49747 757 aaPredicted RBP7.76□□□□□ -1.17
VCAN-208ENST00000512590 DNLZQ5SXM8 178 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 PET117Q6UWS5 81 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 BCDIN3DQ7Z5W3 292 aaKnown RBP7.76□□□□□ -1.17
VCAN-208ENST00000512590 HOGA1Q86XE5 327 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 OR9G1Q8NH87 305 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 CMC2Q9NRP2 79 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 TREX1Q9NSU2 369 aa7.76□□□□□ -1.17
VCAN-208ENST00000512590 KAT6AQ92794 2004 aa7.75□□□□□ -1.17
VCAN-208ENST00000512590 FOXI3A8MTJ6 420 aaPredicted RBP7.75□□□□□ -1.17
VCAN-208ENST00000512590 CFDP00746 253 aaPredicted RBP7.75□□□□□ -1.17
VCAN-208ENST00000512590 TCRBP04435 133 aa7.75□□□□□ -1.17
VCAN-208ENST00000512590 ZNF600Q6ZNG1 722 aa7.75□□□□□ -1.17
VCAN-208ENST00000512590 C10orf126Q8N4M7 172 aa7.75□□□□□ -1.17
VCAN-208ENST00000512590 NTN1O95631 604 aa7.75□□□□□ -1.17
VCAN-208ENST00000512590 NAPSAO96009 420 aa7.75□□□□□ -1.17
VCAN-208ENST00000512590 ZP3P21754 424 aa7.75□□□□□ -1.17
VCAN-208ENST00000512590 ISL1P61371 349 aa7.75□□□□□ -1.17
VCAN-208ENST00000512590 CLEC19AQ6UXS0 136 aa7.75□□□□□ -1.17
VCAN-208ENST00000512590 CBLN4Q9NTU7 201 aa7.75□□□□□ -1.17
VCAN-208ENST00000512590 SMIM6P0DI80 62 aa7.75□□□□□ -1.17
VCAN-208ENST00000512590 ACSF3Q4G176 576 aaPredicted RBP7.75□□□□□ -1.17
VCAN-208ENST00000512590 MRPL54Q6P161 138 aaKnown RBP7.75□□□□□ -1.17
VCAN-208ENST00000512590 MANBALQ9NQG1 85 aa7.75□□□□□ -1.17
VCAN-208ENST00000512590 HMGN4O00479 90 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 GZMBP10144 247 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 TMEM170BQ5T4T1 132 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 OSR1Q8TAX0 266 aaPredicted RBP7.74□□□□□ -1.17
VCAN-208ENST00000512590 OR5AC2Q9NZP5 309 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 DUXBA0A1W2PPF3 345 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 OR4C45A6NMZ5 311 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 TCF21O43680 179 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 RPL8P62917 257 aaKnown RBP7.74□□□□□ -1.17
VCAN-208ENST00000512590 TMEM54Q969K7 222 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 HIST1H4GQ99525 98 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 JKAMPQ9P055 326 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 FBXL7Q9UJT9 491 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 SLC17A2O00624 439 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 VENTXO95231 258 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 RNASEH2CQ8TDP1 164 aaKnown RBP7.74□□□□□ -1.17
VCAN-208ENST00000512590 G6PC2Q9NQR9 355 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 ZNF629Q9UEG4 869 aaPredicted RBP7.74□□□□□ -1.17
VCAN-208ENST00000512590 ASPDHA6ND91 283 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 K7ERU9 68 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 APCSP02743 223 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 SNRPCP09234 159 aaKnown RBP7.74□□□□□ -1.17
VCAN-208ENST00000512590 PLPPR5Q32ZL2 321 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 LINC00596Q86U02 117 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 SLC25A38Q96DW6 304 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 CALYQ9NYX4 217 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 IL19Q9UHD0 177 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 PAX1P15863 534 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 FGF8P55075 233 aaPredicted RBP7.74□□□□□ -1.17
VCAN-208ENST00000512590 HLA-DRB5Q30154 266 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 SPACA3Q8IXA5 215 aa7.74□□□□□ -1.17
VCAN-208ENST00000512590 TMEM250H0YL14 139 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 IGKV1D-33P01593 117 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 IGKV1-33P01594 117 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 GCAP28676 217 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 B2MP61769 119 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 C1QTNF12Q5T7M4 302 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 SUMO4Q6EEV6 95 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 OR5C1Q8NGR4 320 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 PKIGQ9Y2B9 76 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 H0Y980 276 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 HLA-DQA1P01909 254 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 MFAP2P55001 183 aa7.73□□□□□ -1.17
VCAN-208ENST00000512590 GLDNQ6ZMI3 551 aaPredicted RBP7.73□□□□□ -1.17
VCAN-208ENST00000512590 OR52I2Q8NH67 350 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms