RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 PYY3Q5JQD4 70 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 AKR1C8PQ5T2L2 129 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 FAM162BQ5T6X4 162 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 SFXN4Q6P4A7 337 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 C17orf64Q86WR6 236 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 CALHM3Q86XJ0 350 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 C11orf42Q8N5U0 333 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 FAM24BQ8N5W8 94 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF614Q8N883 585 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR1L3Q8NH93 324 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 FLVCR1-AS1Q8TAF5 88 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 DCUN1D4Q92564 292 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 ARL11Q969Q4 196 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 HIST1H2BAQ96A08 127 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 MRPL24Q96A35 216 aaKnown RBP4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 ROPN1LQ96C74 230 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 AURKBQ96GD4 344 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 PGLYRP3Q96LB9 341 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF681Q96N22 645 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR4K3Q96R72 315 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 TMEM59Q9BXS4 323 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 SMIM3Q9BZL3 60 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 MED28Q9H204 178 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF442Q9H7R0 627 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 PELI2Q9HAT8 420 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 POPDC3Q9HBV1 291 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 SH2D2AQ9NP31 389 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 SCN3BQ9NY72 215 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 RAB22AQ9UL26 194 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 NEUROG3Q9Y4Z2 214 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 OARD1Q9Y530 152 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF780BQ9Y6R6 833 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 URB1O60287 2271 aaKnown RBP4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 IGSF10Q6WRI0 2623 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 SNRNP200O75643 2136 aaKnown RBP4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 DHRS12A0PJE2 317 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 SYNGR1O43759 233 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZIC3O60481 467 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 STK16O75716 305 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 PLAUP00749 431 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 TCN2P20062 427 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 PRKACGP22612 351 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 S100A2P29034 98 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 GZMMP51124 257 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 MXD1Q05195 221 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 PRDX1Q06830 199 aaKnown RBP4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR5I1Q13606 314 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 OR8B8Q15620 311 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 TPTE2P1Q5T6R2 138 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 ARL9Q6T311 187 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 WDR82Q6UXN9 313 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 SHISA6Q6ZSJ9 500 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 CBLN2Q8IUK8 224 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 RNF175Q8N4F7 328 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 ZNF555Q8NEP9 628 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 FGGYQ96C11 551 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 CCDC115Q96NT0 180 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 OXGR1Q96P68 337 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 ATOH8Q96SQ7 321 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 C20orf27Q9GZN8 174 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 NPFFR1Q9GZQ6 430 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 FBXL15Q9H469 300 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 PRORYQ9H606 182 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 ACKR4Q9NPB9 350 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 SDR39U1Q9NRG7 319 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 ING1Q9UK53 422 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 RARRES3Q9UL19 164 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 CARHSP1Q9Y2V2 147 aaKnown RBP4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 HS3ST3B1Q9Y662 390 aa4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 SPENQ96T58 3664 aaKnown RBP4.22□□□□□ -1.73
TRAPPC11-208ENST00000511955 CACNA1GO43497 2377 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 TMEM72A0PK05 275 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 TMEM218A2RU14 115 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 LRIT2A6NDA9 550 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 FAM90A26D6RGX4 464 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 M0R082 166 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 SAP18O00422 153 aaKnown RBP4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 FCN1O00602 326 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 LCE2BO14633 110 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 SPINT2O43291 252 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 WDR1O75083 606 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 WISP3O95389 354 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 CD8AP01732 235 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 CRYGDP07320 174 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 IL6RP08887 468 aaPredicted RBP4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR5H8P0DN80 308 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 EDNRAP25101 427 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 TNFSF8P32971 234 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 HRH1P35367 487 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 TGFBR1P36897 503 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 GALR1P47211 349 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 OR1D4P47884 311 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 TAS2R30P59541 319 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 RPS18P62269 152 aaKnown RBP4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 HOXC5Q00444 222 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 PLP2Q04941 152 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 GAGE2BQ13066 116 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 PEA15Q15121 130 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 GAGE2EQ4V326 116 aa4.21□□□□□ -1.74
TRAPPC11-208ENST00000511955 TECRLQ5HYJ1 363 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms