RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 UTS2BQ765I0 119 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 SAXO1Q8IYX7 474 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 OR52M1Q8NGK5 317 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 OR13C3Q8NGS6 347 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 RGP1Q92546 391 aaPredicted RBP8.86□□□□□ -0.99
RNF4-216ENST00000511859 GHSRQ92847 366 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 SPSB1Q96BD6 273 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 NR1H4Q96RI1 486 aaPredicted RBP8.86□□□□□ -0.99
RNF4-216ENST00000511859 RSRP1Q9BUV0 290 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 ST6GALNAC5Q9BVH7 336 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 CEPT1Q9Y6K0 416 aa8.86□□□□□ -0.99
RNF4-216ENST00000511859 IGKV1-9A0A0C4DH69 117 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 TMEM212A6NML5 194 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 ZNF736B4DX44 427 aaPredicted RBP8.85□□□□□ -0.99
RNF4-216ENST00000511859 ATP6V0E1O15342 81 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 SLC2A2P11168 524 aaPredicted RBP8.85□□□□□ -0.99
RNF4-216ENST00000511859 SOX2P48431 317 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 TAS2R43P59537 309 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 CCDC58Q4VC31 144 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 TMEM244Q5VVB8 128 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 DMKNQ6E0U4 476 aaPredicted RBP8.85□□□□□ -0.99
RNF4-216ENST00000511859 ZNF367Q7RTV3 350 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 HAPLN4Q86UW8 402 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 MRGPRDQ8TDS7 321 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 TSEN15Q8WW01 171 aaKnown RBP8.85□□□□□ -0.99
RNF4-216ENST00000511859 TMEM203Q969S6 136 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 ORAI1Q96D31 301 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 SMIM19Q96E16 107 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 OPALINQ96PE5 141 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 MGLLQ99685 303 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 RETNQ9HD89 108 aa8.85□□□□□ -0.99
RNF4-216ENST00000511859 A0A087WXM4 84 aa8.84□□□□□ -0.99
RNF4-216ENST00000511859 MRPS14O60783 128 aaKnown RBP8.84□□□□□ -0.99
RNF4-216ENST00000511859 HLA-DRB1P01911 266 aa8.84□□□□□ -0.99
RNF4-216ENST00000511859 SMIM18P0DKX4 95 aa8.84□□□□□ -0.99
RNF4-216ENST00000511859 SSTR5P35346 364 aa8.84□□□□□ -0.99
RNF4-216ENST00000511859 KCNJ3P48549 501 aa8.84□□□□□ -0.99
RNF4-216ENST00000511859 INSL4Q14641 139 aa8.84□□□□□ -0.99
RNF4-216ENST00000511859 Q3ZCU0 254 aa8.84□□□□□ -0.99
RNF4-216ENST00000511859 PAN3Q58A45 887 aaKnown RBP8.84□□□□□ -0.99
RNF4-216ENST00000511859 UBE2UQ5VVX9 321 aa8.84□□□□□ -0.99
RNF4-216ENST00000511859 TCTEX1D1Q8N7M0 179 aa8.84□□□□□ -0.99
RNF4-216ENST00000511859 UFD1Q92890 307 aa8.84□□□□□ -0.99
RNF4-216ENST00000511859 FGGYQ96C11 551 aa8.84□□□□□ -0.99
RNF4-216ENST00000511859 PGLYRP3Q96LB9 341 aa8.84□□□□□ -0.99
RNF4-216ENST00000511859 NABP2Q9BQ15 211 aa8.84□□□□□ -0.99
RNF4-216ENST00000511859 FAM110AQ9BQ89 295 aa8.84□□□□□ -0.99
RNF4-216ENST00000511859 PARP11Q9NR21 331 aa8.84□□□□□ -0.99
RNF4-216ENST00000511859 IGHV7-81A0A0B4J1V7 117 aa8.83□□□□□ -1
RNF4-216ENST00000511859 A0A1W2PPK0 400 aa8.83□□□□□ -1
RNF4-216ENST00000511859 SHISA3A0PJX4 238 aa8.83□□□□□ -1
RNF4-216ENST00000511859 HSPB6O14558 160 aa8.83□□□□□ -1
RNF4-216ENST00000511859 RGS11O94810 467 aa8.83□□□□□ -1
RNF4-216ENST00000511859 ISG15P05161 165 aa8.83□□□□□ -1
RNF4-216ENST00000511859 OCM2P0CE71 109 aa8.83□□□□□ -1
RNF4-216ENST00000511859 OCMP0CE72 109 aaPredicted RBP8.83□□□□□ -1
RNF4-216ENST00000511859 ZNF20P17024 532 aa8.83□□□□□ -1
RNF4-216ENST00000511859 FSTP19883 344 aa8.83□□□□□ -1
RNF4-216ENST00000511859 RPS25P62851 125 aaKnown RBP8.83□□□□□ -1
RNF4-216ENST00000511859 MLLT11Q13015 90 aaPredicted RBP8.83□□□□□ -1
RNF4-216ENST00000511859 MMDQ15546 238 aa8.83□□□□□ -1
RNF4-216ENST00000511859 RSBN1Q5VWQ0 802 aaPredicted RBP8.83□□□□□ -1
RNF4-216ENST00000511859 PYHIN1Q6K0P9 492 aa8.83□□□□□ -1
RNF4-216ENST00000511859 RPP25LQ8N5L8 163 aaKnown RBP8.83□□□□□ -1
RNF4-216ENST00000511859 ADAT3Q96EY9 351 aaPredicted RBP8.83□□□□□ -1
RNF4-216ENST00000511859 THAP7Q9BT49 309 aaPredicted RBP8.83□□□□□ -1
RNF4-216ENST00000511859 DHDHQ9UQ10 334 aa8.83□□□□□ -1
RNF4-216ENST00000511859 TRAV24A0A0B4J272 114 aa8.82□□□□□ -1
RNF4-216ENST00000511859 CPEP16870 476 aa8.82□□□□□ -1
RNF4-216ENST00000511859 ZNF137PP52743 207 aa8.82□□□□□ -1
RNF4-216ENST00000511859 RPS11P62280 158 aaKnown RBP eCLIP8.82□□□□□ -1
RNF4-216ENST00000511859 TPBGQ13641 420 aa8.82□□□□□ -1
RNF4-216ENST00000511859 SSX1Q16384 188 aa8.82□□□□□ -1
RNF4-216ENST00000511859 LIN54Q6MZP7 749 aa8.82□□□□□ -1
RNF4-216ENST00000511859 SLC25A48Q6ZT89 311 aaKnown RBP8.82□□□□□ -1
RNF4-216ENST00000511859 GPR148Q8TDV2 347 aa8.82□□□□□ -1
RNF4-216ENST00000511859 MUL1Q969V5 352 aa8.82□□□□□ -1
RNF4-216ENST00000511859 TMEM106AQ96A25 262 aa8.82□□□□□ -1
RNF4-216ENST00000511859 RFT1Q96AA3 541 aa8.82□□□□□ -1
RNF4-216ENST00000511859 SPACA5Q96QH8 159 aa8.82□□□□□ -1
RNF4-216ENST00000511859 OR14A2Q96R54 314 aa8.82□□□□□ -1
RNF4-216ENST00000511859 CST11Q9H112 138 aa8.82□□□□□ -1
RNF4-216ENST00000511859 GFOD1Q9NXC2 390 aa8.82□□□□□ -1
RNF4-216ENST00000511859 FOXA2Q9Y261 457 aaPredicted RBP8.82□□□□□ -1
RNF4-216ENST00000511859 A0A1W2PN81 502 aa8.81□□□□□ -1
RNF4-216ENST00000511859 NUPR2A6NF83 97 aa8.81□□□□□ -1
RNF4-216ENST00000511859 SDCBPO00560 298 aaPredicted RBP8.81□□□□□ -1
RNF4-216ENST00000511859 SOX15O60248 233 aa8.81□□□□□ -1
RNF4-216ENST00000511859 CNIH1O95406 144 aa8.81□□□□□ -1
RNF4-216ENST00000511859 BRI3O95415 125 aa8.81□□□□□ -1
RNF4-216ENST00000511859 ZP3P21754 424 aa8.81□□□□□ -1
RNF4-216ENST00000511859 CD40LGP29965 261 aa8.81□□□□□ -1
RNF4-216ENST00000511859 BLVRBP30043 206 aaPredicted RBP8.81□□□□□ -1
RNF4-216ENST00000511859 CHRNA7P36544 502 aa8.81□□□□□ -1
RNF4-216ENST00000511859 CRIP2P52943 208 aaPredicted RBP8.81□□□□□ -1
RNF4-216ENST00000511859 TMEM267Q0VDI3 215 aaPredicted RBP8.81□□□□□ -1
RNF4-216ENST00000511859 YIF1BQ5BJH7 314 aa8.81□□□□□ -1
RNF4-216ENST00000511859 C19orf54Q5BKX5 351 aa8.81□□□□□ -1
RNF4-216ENST00000511859 LCN12Q6JVE5 192 aa8.81□□□□□ -1
RNF4-216ENST00000511859 OR5D18Q8NGL1 313 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms