RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 TRBV24-1A0A075B6N3 115 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 LYPD8Q6UX82 237 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 OR8A1Q8NGG7 326 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 RND1Q92730 232 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 FGF22Q9HCT0 170 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 SERGEFQ9UGK8 458 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 TMPRSS3P57727 454 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 ZNF506Q5JVG8 444 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 SIGMAR1Q99720 223 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 HOXA5P20719 270 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 PAPPAQ13219 1627 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 ADAMTS7Q9UKP4 1686 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 TSC2P49815 1807 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 LEPROTL1O95214 131 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 SLC25A2Q9BXI2 301 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 ASCL3Q9NQ33 180 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 LIPT2A6NK58 231 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 SMIM13P0DJ93 91 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 OR1B1Q8NGR6 318 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 HCFC1R1Q9NWW0 138 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 TBL2Q9Y4P3 447 aaKnown RBP7.34□□□□□ -1.23
HTT-208ENST00000510626 UCP3P55916 312 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 RBPMS2Q6ZRY4 209 aaKnown RBP7.34□□□□□ -1.23
HTT-208ENST00000510626 ZNF683Q8IZ20 524 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 NKX2-6A6NCS4 301 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 KIR3DL2P43630 455 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 HIST1H2BAQ96A08 127 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 SPSB4Q96A44 273 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 MRPL13Q9BYD1 178 aaKnown RBP7.34□□□□□ -1.23
HTT-208ENST00000510626 HYPMO75409 117 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 NGFP01138 241 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 CTLA4P16410 223 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 NPY1RP25929 384 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 CEACAM16Q2WEN9 425 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 FAM117AQ9C073 453 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 RNF186Q9NXI6 227 aa7.34□□□□□ -1.23
HTT-208ENST00000510626 RBP4P02753 201 aa7.34□□□□□ -1.24
HTT-208ENST00000510626 LINC00869P0C866 280 aa7.34□□□□□ -1.24
HTT-208ENST00000510626 KIR2DL1P43626 348 aaPredicted RBP7.34□□□□□ -1.24
HTT-208ENST00000510626 KIR2DL2P43627 348 aaPredicted RBP7.34□□□□□ -1.24
HTT-208ENST00000510626 YRDCQ86U90 279 aaKnown RBP7.34□□□□□ -1.24
HTT-208ENST00000510626 MRGPRDQ8TDS7 321 aa7.34□□□□□ -1.24
HTT-208ENST00000510626 SMPXQ9UHP9 88 aa7.34□□□□□ -1.24
HTT-208ENST00000510626 HPRT1P00492 218 aa7.34□□□□□ -1.24
HTT-208ENST00000510626 QTRT1Q9BXR0 403 aaKnown RBP7.34□□□□□ -1.24
HTT-208ENST00000510626 C12orf49Q9H741 205 aa7.34□□□□□ -1.24
HTT-208ENST00000510626 UFC1Q9Y3C8 167 aa7.34□□□□□ -1.24
HTT-208ENST00000510626 TRAV39A0A0B4J263 110 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 SRD5A2P31213 254 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 GAPTQ8N292 157 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 HIGD1AQ9Y241 93 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 CADM4Q8NFZ8 388 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 TRBV5-7A0A0A0MS05 114 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 TM4SF4P48230 202 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 ERGP11308 486 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 ZNF793Q6ZN11 406 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 CA5BP1Q8WTZ4 195 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 HCFC2Q9Y5Z7 792 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 TNFRSF9Q07011 255 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 LILRA3Q8N6C8 439 aaPredicted RBP7.33□□□□□ -1.24
HTT-208ENST00000510626 ALKBH7Q9BT30 221 aaPredicted RBP7.33□□□□□ -1.24
HTT-208ENST00000510626 IL4P05112 153 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 GVQW1Q8N7I0 195 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 SLC25A40Q8TBP6 338 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 MS4A6AQ9H2W1 248 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 WBP1LQ9NX94 342 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 TNRC6AQ8NDV7 1962 aaKnown RBP7.33□□□□□ -1.24
HTT-208ENST00000510626 A0A1B0GTL3 188 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 IFITM2Q01629 132 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 J3QT63 122 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 RAB29O14966 203 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 FAM157CP0CG43 387 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 AESQ08117 197 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.33□□□□□ -1.247e-6■□□□□ 11
HTT-208ENST00000510626 CALHM1Q8IU99 346 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 C12orf76Q8N812 135 aaPredicted RBP7.33□□□□□ -1.24
HTT-208ENST00000510626 BADQ92934 168 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 CCL27Q9Y4X3 112 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 GREB1Q4ZG55 1949 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 NDUFB3O43676 98 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 CD1BP29016 333 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 THSD4Q6ZMP0 1018 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 CYP2G1PQ6ZSU1 146 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 H3BVH4 76 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 PAGE4O60829 102 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 TMEM11P17152 192 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 ALG14Q96F25 216 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 TLNRD1Q9H1K6 362 aa7.33□□□□□ -1.24
HTT-208ENST00000510626 INSL4Q14641 139 aa7.32□□□□□ -1.24
HTT-208ENST00000510626 ZNF519Q8TB69 540 aa7.32□□□□□ -1.24
HTT-208ENST00000510626 OR2H1Q9GZK4 316 aa7.32□□□□□ -1.24
HTT-208ENST00000510626 MMP17Q9ULZ9 603 aa7.32□□□□□ -1.24
HTT-208ENST00000510626 MALRD1Q5VYJ5 2156 aa7.32□□□□□ -1.24
HTT-208ENST00000510626 IFITM3Q01628 133 aa7.32□□□□□ -1.24
HTT-208ENST00000510626 FBXO46Q6PJ61 603 aaPredicted RBP7.32□□□□□ -1.24
HTT-208ENST00000510626 PLPPR1Q8TBJ4 325 aa7.32□□□□□ -1.24
HTT-208ENST00000510626 KCNS1Q96KK3 526 aa7.32□□□□□ -1.24
HTT-208ENST00000510626 ALKBH3Q96Q83 286 aaPredicted RBP7.32□□□□□ -1.24
HTT-208ENST00000510626 GNB1LQ9BYB4 327 aa7.32□□□□□ -1.24
HTT-208ENST00000510626 FLRT3Q9NZU0 649 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms