RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 C8orf31Q8N9H6 132 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 OR56B1Q8NGI3 324 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 RAB3CQ96E17 227 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 EAF1Q96JC9 268 aaPredicted RBP10.79□□□□□ -0.68
SNF8-206ENST00000509989 KCTD7Q96MP8 289 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 CMSS1Q9BQ75 279 aaKnown RBP10.79□□□□□ -0.68
SNF8-206ENST00000509989 NAA50Q9GZZ1 169 aaKnown RBP10.79□□□□□ -0.68
SNF8-206ENST00000509989 ATG5Q9H1Y0 275 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 IFI27L2Q9H2X8 130 aa10.79□□□□□ -0.68
SNF8-206ENST00000509989 RRP9O43818 475 aaKnown RBP10.78□□□□□ -0.68
SNF8-206ENST00000509989 YPEL1O60688 119 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 PROP1O75360 226 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 OR2F2O95006 317 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 GAPDHP04406 335 aaKnown RBP10.78□□□□□ -0.68
SNF8-206ENST00000509989 CD28P10747 220 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 TMEM11P17152 192 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 RAB6AP20340 208 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 RPS19P39019 145 aaKnown RBP10.78□□□□□ -0.68
SNF8-206ENST00000509989 MNDAP41218 407 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 RAB7AP51149 207 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 HTD2P86397 168 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 HES1Q14469 280 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 RPL39P5Q59GN2 51 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 IDNKQ5T6J7 187 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 TRAT1Q6PIZ9 186 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 TPRA1Q86W33 373 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 Q8N6K4 173 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 DTX3Q8N9I9 347 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 OR2T6Q8NHC8 308 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 CREB3L1Q96BA8 519 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 SLC25A38Q96DW6 304 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 ABHD14BQ96IU4 210 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 YPEL2Q96QA6 119 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 ZNF251Q9BRH9 671 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 ABHD14AQ9BUJ0 271 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 MRPL20Q9BYC9 149 aaKnown RBP10.78□□□□□ -0.68
SNF8-206ENST00000509989 PRSS22Q9GZN4 317 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 WNT10AQ9GZT5 417 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 RAB18Q9NP72 206 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 PLSCR3Q9NRY6 295 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 JPT1Q9UK76 154 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 PITPNC1Q9UKF7 332 aa10.78□□□□□ -0.68
SNF8-206ENST00000509989 SAA2-SAA4A0A096LPE2 208 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 AIREO43918 545 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 FCGR3AP08637 254 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 GSTT2P0CG29 244 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 GSTT2BP0CG30 244 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 SAA2P0DJI9 122 aaPredicted RBP10.77□□□□□ -0.69
SNF8-206ENST00000509989 PTHLHP12272 177 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 HIST1H1DP16402 221 aaKnown RBP10.77□□□□□ -0.69
SNF8-206ENST00000509989 CNTFRP26992 372 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 ZNF137PP52743 207 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 F2RL1P55085 397 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 IGSF11Q5DX21 431 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 TCTEX1D4Q5JR98 221 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 C9orf152Q5JTZ5 239 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 PRR31Q5SQ13 230 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 CCDC144NLQ6NUI1 221 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 THNSL2Q86YJ6 484 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 OR8H3Q8N146 312 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 GALMQ96C23 342 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 C12orf4Q9NQ89 552 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 SLC23A1Q9UHI7 598 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 LINC00527Q9UJ94 153 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 RNF150Q9ULK6 438 aa10.77□□□□□ -0.69
SNF8-206ENST00000509989 ADARB2-AS1A8MUL3 147 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 H3BUI4 141 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 SSX5O60225 188 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 CEACAM6P40199 344 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 NCS1P62166 190 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 EBI3Q14213 229 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 Q3ZCU0 254 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 CDNFQ49AH0 187 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 C11orf88Q6PI97 169 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 GLDNQ6ZMI3 551 aaPredicted RBP10.76□□□□□ -0.69
SNF8-206ENST00000509989 ZNF554Q86TJ5 538 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 TGIF2LXQ8IUE1 241 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 C5orf56Q8N8D9 126 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 SGMS2Q8NHU3 365 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 NUDCD2Q8WVJ2 157 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 C5orf30Q96GV9 206 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 NOL4LQ96MY1 436 aaPredicted RBP10.76□□□□□ -0.69
SNF8-206ENST00000509989 NABP2Q9BQ15 211 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 AGMATQ9BSE5 352 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 FUNDC2Q9BWH2 189 aa10.76□□□□□ -0.69
SNF8-206ENST00000509989 C11orf54Q9H0W9 315 aaPredicted RBP10.76□□□□□ -0.69
SNF8-206ENST00000509989 TMEM235A6NFC5 223 aa10.75□□□□□ -0.69
SNF8-206ENST00000509989 TRDCB7Z8K6 153 aa10.75□□□□□ -0.69
SNF8-206ENST00000509989 FAM106CPP0CH98 169 aa10.75□□□□□ -0.69
SNF8-206ENST00000509989 VDAC2P45880 294 aaPredicted RBP10.75□□□□□ -0.69
SNF8-206ENST00000509989 VBP1P61758 197 aa10.75□□□□□ -0.69
SNF8-206ENST00000509989 LSAMPQ13449 338 aa10.75□□□□□ -0.69
SNF8-206ENST00000509989 ZNF260Q3ZCT1 412 aa10.75□□□□□ -0.69
SNF8-206ENST00000509989 ZNF833PQ6ZTB9 187 aa10.75□□□□□ -0.69
SNF8-206ENST00000509989 Q8N9W7 124 aa10.75□□□□□ -0.69
SNF8-206ENST00000509989 PTX4Q96A99 478 aa10.75□□□□□ -0.69
SNF8-206ENST00000509989 CITED2Q99967 270 aaPredicted RBP10.75□□□□□ -0.69
SNF8-206ENST00000509989 ABRACLQ9P1F3 81 aa10.75□□□□□ -0.69
SNF8-206ENST00000509989 MOB4Q9Y3A3 225 aa10.75□□□□□ -0.69
SNF8-206ENST00000509989 LANCL1O43813 399 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms