RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 CHMP1AQ9HD42 196 aaPredicted RBP12.04□□□□□ -0.48
TPM3-219ENST00000509409 ABRACLQ9P1F3 81 aa12.04□□□□□ -0.48
TPM3-219ENST00000509409 DNAH9Q9NYC9 4486 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 SEC14L6B5MCN3 397 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 YPEL1O60688 119 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 IGF1P05019 195 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 ECI1P42126 302 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 CFHR3Q02985 330 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 INSL4Q14641 139 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 RBM48Q5RL73 367 aaKnown RBP12.03□□□□□ -0.48
TPM3-219ENST00000509409 LAIR2Q6ISS4 152 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 MS4A15Q8N5U1 240 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 OR2AK2Q8NG84 335 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 OR11H1Q8NG94 326 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 SETD6Q8TBK2 473 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 C4orf3Q8WVX3 66 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 IL1F10Q8WWZ1 152 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 RITA1Q96K30 269 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 YPEL2Q96QA6 119 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 NABP2Q9BQ15 211 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 SULT4A1Q9BR01 284 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 CHCHD6Q9BRQ6 235 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 TMED9Q9BVK6 235 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 PARP11Q9NR21 331 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 KIAA1456Q9P272 454 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 STEAP1Q9UHE8 339 aa12.03□□□□□ -0.48
TPM3-219ENST00000509409 PTGES3LE9PB15 166 aa12.02□□□□□ -0.49
TPM3-219ENST00000509409 G3V318 75 aa12.02□□□□□ -0.49
TPM3-219ENST00000509409 CNTFRP26992 372 aa12.02□□□□□ -0.49
TPM3-219ENST00000509409 PSMB8P28062 276 aa12.02□□□□□ -0.49
TPM3-219ENST00000509409 OR3A3P47888 321 aa12.02□□□□□ -0.49
TPM3-219ENST00000509409 FAM27D1Q5T7N8 215 aa12.02□□□□□ -0.49
TPM3-219ENST00000509409 LIN54Q6MZP7 749 aa12.02□□□□□ -0.49
TPM3-219ENST00000509409 PRR25Q96S07 402 aa12.02□□□□□ -0.49
TPM3-219ENST00000509409 MND1Q9BWT6 205 aa12.02□□□□□ -0.49
TPM3-219ENST00000509409 TMEM59Q9BXS4 323 aa12.02□□□□□ -0.49
TPM3-219ENST00000509409 ANKRD60Q9BZ19 345 aa12.02□□□□□ -0.49
TPM3-219ENST00000509409 OR51J1Q9H342 316 aa12.02□□□□□ -0.49
TPM3-219ENST00000509409 NBR2O15453 112 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 VSIG8P0DPA2 414 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 CHATP28329 748 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 RPS27AP62979 156 aaKnown RBP12.01□□□□□ -0.49
TPM3-219ENST00000509409 ZNF260Q3ZCT1 412 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 OGFRL1Q5TC84 451 aaPredicted RBP12.01□□□□□ -0.49
TPM3-219ENST00000509409 C6orf201Q7Z4U5 140 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 CEACAM19Q7Z692 300 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 LRRTM1Q86UE6 522 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 ODF3L1Q8IXM7 274 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 OR1N2Q8NGR9 330 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 KCNG3Q8TAE7 436 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 FBLIM1Q8WUP2 373 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 WWC2-AS2Q96NR7 200 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 OR5B12Q96R08 314 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 KLK15Q9H2R5 256 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 VCXQ9H320 206 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 PLEKHJ1Q9NW61 149 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 VSIG4Q9Y279 399 aa12.01□□□□□ -0.49
TPM3-219ENST00000509409 TRAV41A0A0B4J266 112 aa12□□□□□ -0.49
TPM3-219ENST00000509409 ATP6V0E1O15342 81 aa12□□□□□ -0.49
TPM3-219ENST00000509409 ST8SIA5O15466 376 aa12□□□□□ -0.49
TPM3-219ENST00000509409 HLA-DRB1P01911 266 aa12□□□□□ -0.49
TPM3-219ENST00000509409 CDK1P06493 297 aa12□□□□□ -0.49
TPM3-219ENST00000509409 NHLRC4P0CG21 123 aaPredicted RBP12□□□□□ -0.49
TPM3-219ENST00000509409 SRMP19623 302 aa12□□□□□ -0.49
TPM3-219ENST00000509409 HTR2CP28335 458 aa12□□□□□ -0.49
TPM3-219ENST00000509409 BLVRBP30043 206 aaPredicted RBP12□□□□□ -0.49
TPM3-219ENST00000509409 PLGLAQ15195 96 aa12□□□□□ -0.49
TPM3-219ENST00000509409 HMGN3Q15651 99 aa12□□□□□ -0.49
TPM3-219ENST00000509409 C5orf64Q2M2E5 130 aa12□□□□□ -0.49
TPM3-219ENST00000509409 HSD17B12Q53GQ0 312 aa12□□□□□ -0.49
TPM3-219ENST00000509409 LY6G6FQ5SQ64 297 aa12□□□□□ -0.49
TPM3-219ENST00000509409 C1orf100Q5SVJ3 147 aa12□□□□□ -0.49
TPM3-219ENST00000509409 C6orf141Q5SZD1 244 aa12□□□□□ -0.49
TPM3-219ENST00000509409 ZNF833PQ6ZTB9 187 aa12□□□□□ -0.49
TPM3-219ENST00000509409 ZNF491Q8N8L2 437 aa12□□□□□ -0.49
TPM3-219ENST00000509409 PHYHIPQ92561 330 aa12□□□□□ -0.49
TPM3-219ENST00000509409 UBE2E2Q96LR5 201 aa12□□□□□ -0.49
TPM3-219ENST00000509409 GNB4Q9HAV0 340 aa12□□□□□ -0.49
TPM3-219ENST00000509409 FKBP14Q9NWM8 211 aa12□□□□□ -0.49
TPM3-219ENST00000509409 SCN3BQ9NY72 215 aa12□□□□□ -0.49
TPM3-219ENST00000509409 ZNF580Q9UK33 172 aa12□□□□□ -0.49
TPM3-219ENST00000509409 SAA2-SAA4A0A096LPE2 208 aa11.99□□□□□ -0.49
TPM3-219ENST00000509409 IGHV7-81A0A0B4J1V7 117 aa11.99□□□□□ -0.49
TPM3-219ENST00000509409 RAB29O14966 203 aa11.99□□□□□ -0.49
TPM3-219ENST00000509409 LY86O95711 162 aa11.99□□□□□ -0.49
TPM3-219ENST00000509409 OR8U8P0C7N1 319 aa11.99□□□□□ -0.49
TPM3-219ENST00000509409 SAA2P0DJI9 122 aaPredicted RBP11.99□□□□□ -0.49
TPM3-219ENST00000509409 PPIFP30405 207 aaKnown RBP11.99□□□□□ -0.49
TPM3-219ENST00000509409 RAB9AP51151 201 aa11.99□□□□□ -0.49
TPM3-219ENST00000509409 SPHARQ15513 63 aa11.99□□□□□ -0.49
TPM3-219ENST00000509409 MED22Q15528 200 aa11.99□□□□□ -0.49
TPM3-219ENST00000509409 NPBQ8NG41 125 aa11.99□□□□□ -0.49
TPM3-219ENST00000509409 ABHD5Q8WTS1 349 aa11.99□□□□□ -0.49
TPM3-219ENST00000509409 NICN1Q9BSH3 213 aa11.99□□□□□ -0.49
TPM3-219ENST00000509409 KCNK15Q9H427 330 aa11.99□□□□□ -0.49
TPM3-219ENST00000509409 PIPOXQ9P0Z9 390 aa11.99□□□□□ -0.49
TPM3-219ENST00000509409 SCOCQ9UIL1 159 aa11.99□□□□□ -0.49
TPM3-219ENST00000509409 GSTP1P09211 210 aaKnown RBP11.98□□□□□ -0.49
TPM3-219ENST00000509409 ZNF616Q08AN1 781 aa11.98□□□□□ -0.49
TPM3-219ENST00000509409 KIAA0141Q14154 515 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms