RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 CD177Q8N6Q3 437 aa11.85□□□□□ -0.51
HMGCL-208ENST00000509389 BEND2Q8NDZ0 799 aa11.85□□□□□ -0.51
HMGCL-208ENST00000509389 TMEM185AQ8NFB2 350 aa11.85□□□□□ -0.51
HMGCL-208ENST00000509389 MRPL30Q8TCC3 161 aaKnown RBP11.85□□□□□ -0.51
HMGCL-208ENST00000509389 C17orf50Q8WW18 174 aa11.85□□□□□ -0.51
HMGCL-208ENST00000509389 SDSLQ96GA7 329 aa11.85□□□□□ -0.51
HMGCL-208ENST00000509389 IFT46Q9NQC8 304 aa11.85□□□□□ -0.51
HMGCL-208ENST00000509389 MBNL3Q9NUK0 354 aaKnown RBP11.85□□□□□ -0.51
HMGCL-208ENST00000509389 TMEM82A0PJX8 343 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 H3BUX3 64 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 DEGS1O15121 323 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 ZNF44P15621 663 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 OR3A1P47881 315 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 MECP2P51608 486 aaKnown RBP11.84□□□□□ -0.51
HMGCL-208ENST00000509389 TAS2R46P59540 309 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 PAN3Q58A45 887 aaKnown RBP11.84□□□□□ -0.51
HMGCL-208ENST00000509389 OR52W1Q6IF63 320 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 FAAP20Q6NZ36 180 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 FAM185AQ8N0U4 392 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 ARRDC1Q8N5I2 433 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 BEST4Q8NFU0 473 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 OR4S1Q8NGB4 309 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 FAM110DQ8TAY7 271 aaPredicted RBP11.84□□□□□ -0.51
HMGCL-208ENST00000509389 PLPPR1Q8TBJ4 325 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 ENKURQ8TC29 256 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 CREB3L1Q96BA8 519 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 AJUBAQ96IF1 538 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 TINAGL1Q9GZM7 467 aaPredicted RBP11.84□□□□□ -0.51
HMGCL-208ENST00000509389 GLS2Q9UI32 602 aa11.84□□□□□ -0.51
HMGCL-208ENST00000509389 TRBV23-1A0A0A0MS06 115 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 FAM240BA0A1B0GVZ2 78 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 UBE2QL1A1L167 161 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 RFPL4AA6NLU0 287 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 RFPL4AL1F8VTS6 287 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 NDUFB6O95139 128 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 RAB3DO95716 219 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 HRH1P35367 487 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 CEBPDP49716 269 aaPredicted RBP11.83□□□□□ -0.52
HMGCL-208ENST00000509389 C2orf68Q2NKX9 166 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 RNASE10Q5GAN6 216 aaKnown RBP11.83□□□□□ -0.52
HMGCL-208ENST00000509389 RSBN1Q5VWQ0 802 aaPredicted RBP11.83□□□□□ -0.52
HMGCL-208ENST00000509389 MOB1BQ7L9L4 216 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 OVCH2Q7RTZ1 564 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 LHFPL1Q86WI0 220 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 C1QL4Q86Z23 238 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 OR5AP2Q8NGF4 316 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 OR5D13Q8NGL4 314 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 PPP1R35Q8TAP8 253 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 SSX3Q99909 188 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 NCOR1P1Q9H4R4 102 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 Q9N2K0 584 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 C19orf12Q9NSK7 152 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 ETAA1Q9NY74 926 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 ANXA10Q9UJ72 324 aa11.83□□□□□ -0.52
HMGCL-208ENST00000509389 A0A0B4J293 547 aa11.82□□□□□ -0.52
HMGCL-208ENST00000509389 SIRPB1O00241 398 aa11.82□□□□□ -0.52
HMGCL-208ENST00000509389 DIRAS3O95661 229 aa11.82□□□□□ -0.52
HMGCL-208ENST00000509389 TCRBP04435 133 aa11.82□□□□□ -0.52
HMGCL-208ENST00000509389 HLA-DMAP28067 261 aa11.82□□□□□ -0.52
HMGCL-208ENST00000509389 PRDX2P32119 198 aa11.82□□□□□ -0.52
HMGCL-208ENST00000509389 LY6EQ16553 131 aa11.82□□□□□ -0.52
HMGCL-208ENST00000509389 ZNF660Q6AZW8 331 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-208ENST00000509389 OR4K15Q8NH41 348 aa11.82□□□□□ -0.52
HMGCL-208ENST00000509389 MRGPRFQ96AM1 343 aa11.82□□□□□ -0.52
HMGCL-208ENST00000509389 COQ2Q96H96 371 aa11.82□□□□□ -0.52
HMGCL-208ENST00000509389 MEGF9Q9H1U4 602 aa11.82□□□□□ -0.52
HMGCL-208ENST00000509389 ZNF230Q9UIE0 474 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-208ENST00000509389 SIGLEC9Q9Y336 463 aa11.82□□□□□ -0.52
HMGCL-208ENST00000509389 NUBP2Q9Y5Y2 271 aa11.82□□□□□ -0.52
HMGCL-208ENST00000509389 M0QYG6 137 aa11.81□□□□□ -0.52
HMGCL-208ENST00000509389 CCR6P51684 374 aa11.81□□□□□ -0.52
HMGCL-208ENST00000509389 COL10A1Q03692 680 aa11.81□□□□□ -0.52
HMGCL-208ENST00000509389 HERPUD1Q15011 391 aa11.81□□□□□ -0.52
HMGCL-208ENST00000509389 RBMS2Q15434 407 aaKnown RBP11.81□□□□□ -0.52
HMGCL-208ENST00000509389 PLET1Q6UQ28 207 aa11.81□□□□□ -0.52
HMGCL-208ENST00000509389 C11orf42Q8N5U0 333 aa11.81□□□□□ -0.52
HMGCL-208ENST00000509389 OR13C8Q8NGS7 320 aa11.81□□□□□ -0.52
HMGCL-208ENST00000509389 OR56B4Q8NH76 319 aa11.81□□□□□ -0.52
HMGCL-208ENST00000509389 SNX22Q96L94 193 aa11.81□□□□□ -0.52
HMGCL-208ENST00000509389 PRRT1Q99946 306 aa11.81□□□□□ -0.52
HMGCL-208ENST00000509389 FAM234AQ9H0X4 552 aa11.81□□□□□ -0.52
HMGCL-208ENST00000509389 ZNF286AQ9HBT8 521 aa11.81□□□□□ -0.52
HMGCL-208ENST00000509389 OR14J1Q9UGF5 321 aa11.81□□□□□ -0.52
HMGCL-208ENST00000509389 KIAA2026Q5HYC2 2103 aa11.81□□□□□ -0.52
HMGCL-208ENST00000509389 NPIPB11E5RHQ5 1161 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 K7N7A8 449 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 HSPB6O14558 160 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 AMY2AP04746 511 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 PAX6P26367 422 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 KIR2DS4P43632 304 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 MRPS15P82914 257 aaKnown RBP11.8□□□□□ -0.52
HMGCL-208ENST00000509389 HMGN3Q15651 99 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 LRRC75BQ2VPJ9 315 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 TMEM200BQ69YZ2 307 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 ZNF554Q86TJ5 538 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 ZNF561Q8N587 486 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 OR51S1Q8NGJ8 323 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 MAFIPQ8WZ33 124 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 CABLES2Q9BTV7 478 aa11.8□□□□□ -0.52
HMGCL-208ENST00000509389 ST6GALNAC5Q9BVH7 336 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms