RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 OR7C1O76099 320 aaPredicted RBP3.63□□□□□ -1.83
NUP54-206ENST00000508465 NDUFA7O95182 113 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 ATP6V1G2O95670 118 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 HSMCR30P0CW71 290 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 CGB3P0DN86 165 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 CGB7P0DN87 165 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 IGFBP3P17936 291 aaPredicted RBP3.63□□□□□ -1.83
NUP54-206ENST00000508465 SERPINA2P20848 420 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 MYF6P23409 242 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 WNT4P56705 351 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 RIPK1Q13546 671 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 RBM39Q14498 530 aaKnown RBP3.63□□□□□ -1.83
NUP54-206ENST00000508465 SPHARQ15513 63 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 C17orf58Q2M2W7 97 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 Q499Y3 187 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 YIF1BQ5BJH7 314 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 SPIN3Q5JUX0 258 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 ATAD3CQ5T2N8 411 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 LIPKQ5VXJ0 399 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 OLFML2AQ68BL7 652 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 ELP2Q6IA86 826 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 DHRS7BQ6IAN0 325 aaPredicted RBP3.63□□□□□ -1.83
NUP54-206ENST00000508465 OR10K2Q6IF99 312 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 SPSB3Q6PJ21 355 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 GLIPR1L1Q6UWM5 242 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 UNQ9370/PRO34162Q6UXP9 181 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 IZUMO2Q6UXV1 221 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 CEACAM19Q7Z692 300 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 OSR2Q8N2R0 312 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 TMEM86BQ8N661 226 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 SUMF2Q8NBJ7 301 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 TMEM104Q8NE00 496 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 PXT1Q8NFP0 134 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 OR11H6Q8NGC7 330 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 OR4D6Q8NGJ1 314 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 OR13D1Q8NGV5 346 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 OR4F5Q8NH21 305 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 LINC01006Q8NI28 216 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 NDNFQ8TB73 568 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 PLPPR1Q8TBJ4 325 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 DYRK2Q92630 601 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 CORO2AQ92828 525 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 PGLYRP3Q96LB9 341 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 CNBD2Q96M20 576 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 DERL3Q96Q80 235 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 S100A13Q99584 98 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 MND1Q9BWT6 205 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 CDCA4Q9BXL8 241 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 TMEM133Q9H2Q1 129 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 DUSP21Q9H596 190 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 AAMDCQ9H7C9 122 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 ZNF286AQ9HBT8 521 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 SCN3BQ9NY72 215 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 CKLFQ9UBR5 152 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 VPREB3Q9UKI3 123 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 ST3GAL6Q9Y274 331 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 MRPS28Q9Y2Q9 187 aaKnown RBP3.63□□□□□ -1.83
NUP54-206ENST00000508465 LSM2Q9Y333 95 aaKnown RBP3.63□□□□□ -1.83
NUP54-206ENST00000508465 POMT1Q9Y6A1 747 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 LINC00312Q9Y6C7 94 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 SESN1Q9Y6P5 492 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 CMYA5Q8N3K9 4069 aa3.63□□□□□ -1.83
NUP54-206ENST00000508465 IGHV2-26A0A0B4J1V2 119 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 KBTBD11-OT1A0A1B0GTJ5 212 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 CLPSL1A2RUU4 121 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 FUOMA2VDF0 154 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 A6NDX4 124 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 ODF3BA8MYP8 253 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 TOR1AO14656 332 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 CRTAPO75718 401 aaPredicted RBP3.62□□□□□ -1.83
NUP54-206ENST00000508465 CLPXO76031 633 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 MT-ND4P03905 459 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 GTF2F2P13984 249 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 SRMP19623 302 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 HTR1DP28221 377 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 ERP29P30040 261 aaKnown RBP3.62□□□□□ -1.83
NUP54-206ENST00000508465 GLP1RP43220 463 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 RBM11P57052 281 aaKnown RBP3.62□□□□□ -1.83
NUP54-206ENST00000508465 ERVFC1-1P60608 527 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 RPL15P61313 204 aaKnown RBP3.62□□□□□ -1.83
NUP54-206ENST00000508465 RPS25P62851 125 aaKnown RBP3.62□□□□□ -1.83
NUP54-206ENST00000508465 BLCAPP62952 87 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 SLC35A2P78381 396 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 HNF4GQ14541 408 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 IRF3Q14653 427 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 P2RY14Q15391 338 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 LRRC75BQ2VPJ9 315 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 HEPN1Q6WQI6 88 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 TMEM91Q6ZNR0 172 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 GDPGP1Q6ZNW5 385 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 LRRTM1Q86UE6 522 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 RTN4RL2Q86UN3 420 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 LYG1Q8N1E2 194 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 ZNF565Q8N9K5 539 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 CHST4Q8NCG5 386 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 Q8NFD4 153 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 OR51T1Q8NGJ9 327 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 OR13A1Q8NGR1 328 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 OR5R1Q8NH85 324 aa3.62□□□□□ -1.83
NUP54-206ENST00000508465 HAVCR2Q8TDQ0 301 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms