RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 OPRL1P41146 370 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 KIR2DS2P43631 304 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 GALR1P47211 349 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 NCMAPQ5T1S8 102 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 BTNL8Q6UX41 500 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 CALHM1Q8IU99 346 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 C11orf44Q8N8P7 122 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 TERB2Q8NHR7 220 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 SEC22CQ9BRL7 303 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 CHST6Q9GZX3 395 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 SNRPGP15A8MWD9 76 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 ARPC5O15511 151 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 TGOLN2O43493 480 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 GGCTO75223 188 aaKnown RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 PMP2P02689 132 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 PATE4P0C8F1 98 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 SCGB1C2P0DMR2 95 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 HTR1DP28221 377 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 SNRPD3P62318 126 aaKnown RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 CD69Q07108 199 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 SMUG1Q53HV7 270 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 WDR88Q6ZMY6 472 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 LCNL1Q6ZST4 164 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 ADGRE4PQ86SQ3 457 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 GDPD1Q8N9F7 314 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 ZFP62Q8NB50 900 aaPredicted RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 SCARB1Q8WTV0 552 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 GHSRQ92847 366 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 FLYWCH2Q96CP2 140 aaKnown RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 METTL26Q96S19 204 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 UBQLN3Q9H347 655 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 DEPPQ9NTK1 212 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 YTHDF2Q9Y5A9 579 aaKnown RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 JMJD1CQ15652 2540 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 GOLGB1Q14789 3259 aaKnown RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 PPIAL4CA0A0B4J2A2 164 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 F8W036 122 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 PRSS23O95084 383 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 SNAP29O95721 258 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 TFAP2AP05549 437 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 SBK3P0C264 359 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 PPIAL4GP0DN37 164 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 MALP21145 153 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 IER3P46695 156 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 CNN1P51911 297 aaKnown RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 SAMD13Q5VXD3 122 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 C17orf82Q86X59 251 aaPredicted RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 SPSB1Q96BD6 273 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 FAM3DQ96BQ1 224 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 WDR34Q96EX3 536 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 CNRIP1Q96F85 164 aaPredicted RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 C18orf12Q96KH6 178 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 C16orf92Q96LL3 132 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 VSTM2LQ96N03 204 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 OR2H1Q9GZK4 316 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 MSL2Q9HCI7 577 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 RBMX2Q9Y388 322 aaKnown RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 RNF114Q9Y508 228 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 MPC1Q9Y5U8 109 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 IGKV3D-11A0A0A0MRZ8 115 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 TRAV40A0A0B4J280 105 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 LOC107986453A0A1B0GWG9 222 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 ST8SIA3O43173 380 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 IGKV3-11P04433 115 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 CD1AP06126 327 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 OR13C7P0DN81 318 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 FUT3P21217 361 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 MAGEB1P43366 347 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 EMP1P54849 157 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 ZP4Q12836 540 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 GK2Q14410 553 aaPredicted RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 GABRA6Q16445 453 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 PCSK4Q6UW60 755 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 TOMM20LQ6UXN7 152 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 OR10J6PQ8NGY7 276 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 OR4S2Q8NH73 311 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 SPACA5Q96QH8 159 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 ZNF426Q9BUY5 554 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 SSBP4Q9BWG4 385 aaPredicted RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 ACTR3CQ9C0K3 210 aaPredicted RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 TMEM38BQ9NVV0 291 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 VAPAQ9P0L0 249 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 A0A0J9YW62 118 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 LEUTXA8MZ59 168 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 GPR31O00270 319 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 MAGEB4O15481 346 aaPredicted RBP2.54□□□□□ -2
NEDD4-208ENST00000508342 FABP7O15540 132 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 PRAF2O60831 178 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 NKX2-2O95096 273 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 SLC25A6P12236 298 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 AKR1C3P42330 323 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 BATFQ16520 125 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 UNQ5815/PRO19632Q6UWF5 114 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 MOB1BQ7L9L4 216 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 C20orf196Q8IYI0 205 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 UBALD1Q8TB05 177 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 RNF141Q8WVD5 230 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 ITLN1Q8WWA0 313 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 PHYHIPQ92561 330 aa2.54□□□□□ -2
NEDD4-208ENST00000508342 SLC25A19Q9HC21 320 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms