RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 WNT4P56705 351 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 HNF4GQ14541 408 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 YIF1BQ5BJH7 314 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 ATAD3CQ5T2N8 411 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 TTC23Q5W5X9 447 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 AWAT2Q6E213 333 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 OR10K2Q6IF99 312 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 GLIPR1L1Q6UWM5 242 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 ZNF497Q6ZNH5 498 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 NDUFA11Q86Y39 141 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 C8orf59Q8N0T1 100 aaPredicted RBP3.83□□□□□ -1.8
CDH9-203ENST00000505045 PRR18Q8N4B5 295 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 JAGN1Q8N5M9 183 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 PACRGLQ8N7B6 248 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 C5orf56Q8N8D9 126 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 ZNF439Q8NDP4 499 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 SETD9Q8NE22 299 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 BPIFB6Q8NFQ5 453 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 OR10V1Q8NGI7 309 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 OR4K15Q8NH41 348 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 OR1L1Q8NH94 360 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 LINC00476Q8WZB0 136 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 MYDGFQ969H8 173 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 RPEQ96AT9 228 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 RAX2Q96IS3 184 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 METTL9Q9H1A3 318 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 MRPS28Q9Y2Q9 187 aaKnown RBP3.83□□□□□ -1.8
CDH9-203ENST00000505045 LSM2Q9Y333 95 aaKnown RBP3.83□□□□□ -1.8
CDH9-203ENST00000505045 MOB4Q9Y3A3 225 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 HSPE1-MOB4S4R3N1 261 aa3.83□□□□□ -1.8
CDH9-203ENST00000505045 IGHV1-3A0A0C4DH29 117 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 TMEM30CPA0ZSE6 113 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 FUOMA2VDF0 154 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 EFCAB10A6NFE3 127 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 ZNF701M0R085 212 aaPredicted RBP3.82□□□□□ -1.8
CDH9-203ENST00000505045 AIPO00170 330 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 TOR1AO14656 332 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 MYL12BO14950 172 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 PEX14O75381 377 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 GPX5O75715 221 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 MT-ND4P03905 459 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 CSTBP04080 98 aaKnown RBP3.82□□□□□ -1.8
CDH9-203ENST00000505045 IGLL1P15814 213 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 MGMTP16455 207 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 UNC119Q13432 240 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 MADCAM1Q13477 382 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 HES1Q14469 280 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 MPV17LQ2QL34 196 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 KHDC1LQ5JSQ8 128 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 C9orf152Q5JTZ5 239 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 C6orf141Q5SZD1 244 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 RAB12Q6IQ22 244 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 C16orf82Q7Z2V1 217 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 GAPTQ8N292 157 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 Q8N6K4 173 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 NANOGP1Q8N7R0 232 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 ZNF565Q8N9K5 539 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 TSPAN14Q8NG11 270 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 HAVCR2Q8TDQ0 301 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 CAPSLQ8WWF8 208 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 TFAP2CQ92754 450 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 BORCS5Q969J3 196 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 ARL11Q969Q4 196 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 ST6GALNAC6Q969X2 333 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 CPNE2Q96FN4 548 aaPredicted RBP3.82□□□□□ -1.8
CDH9-203ENST00000505045 CNBD2Q96M20 576 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 DUX3Q96PT4 197 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 GFI1Q99684 422 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 NICN1Q9BSH3 213 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 TMED9Q9BVK6 235 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 BARHL1Q9BZE3 327 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 SELENOIQ9C0D9 397 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 PARP12Q9H0J9 701 aaKnown RBP3.82□□□□□ -1.8
CDH9-203ENST00000505045 CNOT2Q9NZN8 540 aaKnown RBP3.82□□□□□ -1.8
CDH9-203ENST00000505045 RYR3Q15413 4870 aa3.82□□□□□ -1.8
CDH9-203ENST00000505045 A0A0A6YYD4 124 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 IRGMA1A4Y4 181 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 SDCBPO00560 298 aaPredicted RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 CRTAPO75718 401 aaPredicted RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 SC5DO75845 299 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 CDK1P06493 297 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 GTF2F2P13984 249 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 TMEM11P17152 192 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 BRS3P32247 399 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 CEACAM3P40198 252 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 KCNJ3P48549 501 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 PRRX1P54821 245 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 PLA2G7Q13093 441 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 CT45A1Q5HYN5 189 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 SYT6Q5T7P8 510 aaPredicted RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 LINC00596Q86U02 117 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 LRRTM1Q86UE6 522 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 ODF3L1Q8IXM7 274 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 STX19Q8N4C7 294 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 OR10X1Q8NGY0 326 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 CT45A3Q8NHU0 189 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 MRPL30Q8TCC3 161 aaKnown RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 NEK7Q8TDX7 302 aa3.81□□□□□ -1.8
CDH9-203ENST00000505045 RTN4IP1Q8WWV3 396 aaPredicted RBP3.81□□□□□ -1.8
CDH9-203ENST00000505045 HSPB9Q9BQS6 159 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms