RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 PXT1Q8NFP0 134 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 OR10X1Q8NGY0 326 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 CCDC107Q8WV48 283 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 TNFAIP8L1Q8WVP5 186 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 RTN4IP1Q8WWV3 396 aaPredicted RBP4.56□□□□□ -1.68
GYPB-204ENST00000504951 RFKQ969G6 155 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 ORAI1Q96D31 301 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 LGALS12Q96DT0 336 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 RITA1Q96K30 269 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 DPCDQ9BVM2 203 aaPredicted RBP4.56□□□□□ -1.68
GYPB-204ENST00000504951 BARHL1Q9BZE3 327 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 AMBNQ9NP70 447 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 ERGIC3Q9Y282 383 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 EXOGQ9Y2C4 368 aaKnown RBP4.56□□□□□ -1.68
GYPB-204ENST00000504951 FAT2Q9NYQ8 4349 aa4.56□□□□□ -1.68
GYPB-204ENST00000504951 DNAH17Q9UFH2 4485 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 IGHV4OR15-8A0A075B7B6 117 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 A0A087WW49 117 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 TRAV41A0A0B4J266 112 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 A0A1B0GVY2 172 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 G3V318 75 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 SDCBPO00560 298 aaPredicted RBP4.55□□□□□ -1.68
GYPB-204ENST00000504951 GEMIN2O14893 280 aaKnown RBP4.55□□□□□ -1.68
GYPB-204ENST00000504951 NDUFB8O95169 186 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 HTR3BO95264 441 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 CNIH1O95406 144 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 ALPLP05186 524 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 DBTP11182 482 aaKnown RBP4.55□□□□□ -1.68
GYPB-204ENST00000504951 GABRB1P18505 474 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 SOX2P48431 317 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 SNRPGP62308 76 aaKnown RBP4.55□□□□□ -1.68
GYPB-204ENST00000504951 IL13RA2Q14627 380 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 TMEM30BQ3MIR4 351 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 AKIRIN2Q53H80 203 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 SLC25A30Q5SVS4 291 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 LCN12Q6JVE5 192 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 SERPINA12Q8IW75 414 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 MFSD4AQ8N468 514 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 ZNF439Q8NDP4 499 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 NPBQ8NG41 125 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 OR5D14Q8NGL3 314 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 CENPNQ96H22 339 aaPredicted RBP4.55□□□□□ -1.68
GYPB-204ENST00000504951 OR5B12Q96R08 314 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 ALG8Q9BVK2 526 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 FAM192AQ9GZU8 254 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 CST11Q9H112 138 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 SLA2Q9H6Q3 261 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 RANGRFQ9HD47 186 aaPredicted RBP4.55□□□□□ -1.68
GYPB-204ENST00000504951 IMPAD1Q9NX62 359 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 ERVK13-1Q9NX77 482 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 TAS2R4Q9NYW5 299 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 KIAA1456Q9P272 454 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 ENOPH1Q9UHY7 261 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 ZNF107Q9UII5 783 aaPredicted RBP4.55□□□□□ -1.68
GYPB-204ENST00000504951 ST3GAL6Q9Y274 331 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 TP53TG1Q9Y2A0 90 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 NUBP2Q9Y5Y2 271 aa4.55□□□□□ -1.68
GYPB-204ENST00000504951 IGHV7-81A0A0B4J1V7 117 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 TMEM30CPA0ZSE6 113 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 EI24O14681 340 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 SOX15O60248 233 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 OR7C1O76099 320 aaPredicted RBP4.54□□□□□ -1.68
GYPB-204ENST00000504951 MT-ND4P03905 459 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 LIMS3P0CW19 117 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 LIMS4P0CW20 117 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 SLC2A2P11168 524 aaPredicted RBP4.54□□□□□ -1.68
GYPB-204ENST00000504951 RAB3AP20336 220 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 IL3RAP26951 378 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 RBM11P57052 281 aaKnown RBP4.54□□□□□ -1.68
GYPB-204ENST00000504951 TMEM267Q0VDI3 215 aaPredicted RBP4.54□□□□□ -1.68
GYPB-204ENST00000504951 RSU1Q15404 277 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 CT45A1Q5HYN5 189 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 C1orf146Q5VVC0 180 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 SYS1Q8N2H4 156 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 OR10V1Q8NGI7 309 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 OR9G4Q8NGQ1 327 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 OR13C5Q8NGS8 318 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 OR52N1Q8NH53 320 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 OR5AK2Q8NH90 309 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 CT45A3Q8NHU0 189 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 CASTOR1Q8WTX7 329 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 TSEN15Q8WW01 171 aaKnown RBP4.54□□□□□ -1.68
GYPB-204ENST00000504951 TRUB1Q8WWH5 349 aaKnown RBP4.54□□□□□ -1.68
GYPB-204ENST00000504951 ARL11Q969Q4 196 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 GPER1Q99527 375 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 OVOL2Q9BRP0 275 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 TMED9Q9BVK6 235 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 JAM3Q9BX67 310 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 ALX4Q9H161 411 aaPredicted RBP4.54□□□□□ -1.68
GYPB-204ENST00000504951 IFT22Q9H7X7 185 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 GFOD1Q9NXC2 390 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 ING4Q9UNL4 249 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 DHDHQ9UQ10 334 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 FOXA2Q9Y261 457 aaPredicted RBP4.54□□□□□ -1.68
GYPB-204ENST00000504951 GMPPBQ9Y5P6 360 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 DNAH2Q9P225 4427 aa4.54□□□□□ -1.68
GYPB-204ENST00000504951 DNAH11Q96DT5 4516 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 TMEM212A6NML5 194 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 H3BNX3 289 aa4.53□□□□□ -1.68
GYPB-204ENST00000504951 H3BUA1 57 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms