RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 CD37P11049 281 aa11.3□□□□□ -0.6
HOXC9-202ENST00000504557 RAB3BP20337 219 aa11.3□□□□□ -0.6
HOXC9-202ENST00000504557 PSMD7P51665 324 aa11.3□□□□□ -0.6
HOXC9-202ENST00000504557 TCTEX1D4Q5JR98 221 aa11.3□□□□□ -0.6
HOXC9-202ENST00000504557 SLC35E3Q7Z769 313 aa11.3□□□□□ -0.6
HOXC9-202ENST00000504557 IZUMO1Q8IYV9 350 aa11.3□□□□□ -0.6
HOXC9-202ENST00000504557 OR2AK2Q8NG84 335 aa11.3□□□□□ -0.6
HOXC9-202ENST00000504557 CMSS1Q9BQ75 279 aaKnown RBP11.3□□□□□ -0.6
HOXC9-202ENST00000504557 MRPL20Q9BYC9 149 aaKnown RBP11.3□□□□□ -0.6
HOXC9-202ENST00000504557 SLC23A1Q9UHI7 598 aa11.3□□□□□ -0.6
HOXC9-202ENST00000504557 NOTCH3Q9UM47 2321 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 LINC01548A6NM66 108 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 HSPA12AO43301 675 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 NAPSAO96009 420 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 OPN1MWP04001 364 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 OPN1MW2P0DN77 364 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 OPN1MW3P0DN78 364 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 SLC2A2P11168 524 aaPredicted RBP11.29□□□□□ -0.6
HOXC9-202ENST00000504557 CD1BP29016 333 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 TMEM50BP56557 158 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 HLA-DRB3P79483 266 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 MRPS15P82914 257 aaKnown RBP11.29□□□□□ -0.6
HOXC9-202ENST00000504557 HTD2P86397 168 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 NEDD8Q15843 81 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 MOGAT2Q3SYC2 334 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 Q3ZCU0 254 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 UBE2UQ5VVX9 321 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 OR4F17Q8NGA8 305 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 OR56B1Q8NGI3 324 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 OR4F4Q96R69 305 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 RASL11BQ9BPW5 248 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 PARP12Q9H0J9 701 aaKnown RBP11.29□□□□□ -0.6
HOXC9-202ENST00000504557 OR1A1Q9P1Q5 309 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 RAB22AQ9UL26 194 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 LRRC42Q9Y546 428 aa11.29□□□□□ -0.6
HOXC9-202ENST00000504557 MEGF8Q7Z7M0 2845 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 SAA2-SAA4A0A096LPE2 208 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 TRAV1-2A0A0B4J238 106 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 IFITM5A6NNB3 132 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 FGF16O43320 207 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 TXNL1O43396 289 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 YPEL1O60688 119 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 MRPS14O60783 128 aaKnown RBP11.28□□□□□ -0.6
HOXC9-202ENST00000504557 SCTP09683 121 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 SAA2P0DJI9 122 aaPredicted RBP11.28□□□□□ -0.6
HOXC9-202ENST00000504557 F2RL1P55085 397 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 CD83Q01151 205 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 LSAMPQ13449 338 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 PLAC9Q5JTB6 97 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 ZNF773Q6PK81 442 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 CD200R1LQ6Q8B3 271 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 MOB1BQ7L9L4 216 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 ZNF554Q86TJ5 538 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 FOXRED2Q8IWF2 684 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 ODF3L1Q8IXM7 274 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 FAM89BQ8N5H3 189 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 Q8N9W7 124 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 MAFIPQ8WZ33 124 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 FCGR1BQ92637 280 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 RAB3CQ96E17 227 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 YPEL2Q96QA6 119 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 C12orf4Q9NQ89 552 aa11.28□□□□□ -0.6
HOXC9-202ENST00000504557 TXNL4BQ9NX01 149 aaKnown RBP11.28□□□□□ -0.6
HOXC9-202ENST00000504557 TSSC4Q9Y5U2 329 aaPredicted RBP11.28□□□□□ -0.6
HOXC9-202ENST00000504557 FOXI3A8MTJ6 420 aaPredicted RBP11.27□□□□□ -0.61
HOXC9-202ENST00000504557 LDLRAD4O15165 306 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 LANCL1O43813 399 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 PF4P02776 101 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 PRB2P02812 416 aaPredicted RBP11.27□□□□□ -0.61
HOXC9-202ENST00000504557 CD3GP09693 182 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 GNB3P16520 340 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 CEACAM6P40199 344 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 ZNF137PP52743 207 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 EBI3Q14213 229 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 MMDQ15546 238 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 RPL39P5Q59GN2 51 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 ZNF880Q6PDB4 577 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 GLDNQ6ZMI3 551 aaPredicted RBP11.27□□□□□ -0.61
HOXC9-202ENST00000504557 NR2C2APQ86WQ0 139 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 Q8N6K4 173 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 ABHD14BQ96IU4 210 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 S1PR3Q99500 378 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 CHCHD6Q9BRQ6 235 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 YTHDF1Q9BYJ9 559 aaKnown RBP11.27□□□□□ -0.61
HOXC9-202ENST00000504557 ATG5Q9H1Y0 275 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 OR51E2Q9H255 320 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 IFI27L2Q9H2X8 130 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 RIMS4Q9H426 269 aaPredicted RBP11.27□□□□□ -0.61
HOXC9-202ENST00000504557 Q9N2K0 584 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 RNF150Q9ULK6 438 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 HSF4Q9ULV5 492 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 STUB1Q9UNE7 303 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 SSR3Q9UNL2 185 aa11.27□□□□□ -0.61
HOXC9-202ENST00000504557 LOC100506127A0A0U1RQW1 187 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 NUDT19A8MXV4 375 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 CD33P20138 364 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 GADD45AP24522 165 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 CNTFRP26992 372 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 RANBP1P43487 201 aa11.26□□□□□ -0.61
HOXC9-202ENST00000504557 GPR12P47775 334 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms