RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 Q3ZCU0 254 aa7.05□□□□□ -1.28
DHFR-202ENST00000504396 SYT6Q5T7P8 510 aaPredicted RBP7.05□□□□□ -1.28
DHFR-202ENST00000504396 KDM4DQ6B0I6 523 aa7.05□□□□□ -1.28
DHFR-202ENST00000504396 ZNF429Q86V71 674 aa7.05□□□□□ -1.28
DHFR-202ENST00000504396 Q8N6K4 173 aa7.05□□□□□ -1.28
DHFR-202ENST00000504396 ZNF555Q8NEP9 628 aa7.05□□□□□ -1.28
DHFR-202ENST00000504396 PXT1Q8NFP0 134 aa7.05□□□□□ -1.28
DHFR-202ENST00000504396 OR52M1Q8NGK5 317 aa7.05□□□□□ -1.28
DHFR-202ENST00000504396 OR10AC1Q8NH08 325 aa7.05□□□□□ -1.28
DHFR-202ENST00000504396 UBALD1Q8TB05 177 aa7.05□□□□□ -1.28
DHFR-202ENST00000504396 C20orf173Q96LM9 149 aa7.05□□□□□ -1.28
DHFR-202ENST00000504396 KCTD7Q96MP8 289 aa7.05□□□□□ -1.28
DHFR-202ENST00000504396 S1PR3Q99500 378 aa7.05□□□□□ -1.28
DHFR-202ENST00000504396 GPER1Q99527 375 aa7.05□□□□□ -1.28
DHFR-202ENST00000504396 HSPB9Q9BQS6 159 aa7.05□□□□□ -1.28
DHFR-202ENST00000504396 GNB4Q9HAV0 340 aa7.05□□□□□ -1.28
DHFR-202ENST00000504396 G3V2T6 193 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 SDCBPO00560 298 aaPredicted RBP7.04□□□□□ -1.28
DHFR-202ENST00000504396 OVOL1O14753 267 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 TXNL1O43396 289 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 TRAPPC2P0DI81 140 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 TRAPPC2BP0DI82 140 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 GP9P14770 177 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 SPNP16150 400 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 GZMHP20718 246 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 CD1BP29016 333 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 EPHA2P29317 976 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 ZNF691Q5VV52 312 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 RSBN1Q5VWQ0 802 aaPredicted RBP7.04□□□□□ -1.28
DHFR-202ENST00000504396 LYSMD2Q8IV50 215 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 SLC7A5P1Q8MH63 180 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 LINC00311Q8N616 119 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 SETD9Q8NE22 299 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 OR51A4Q8NGJ6 313 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 OR5D14Q8NGL3 314 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 CNIH3Q8TBE1 160 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 NEK7Q8TDX7 302 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 DCUN1D4Q92564 292 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 MRPL48Q96GC5 212 aaKnown RBP7.04□□□□□ -1.28
DHFR-202ENST00000504396 KRTAP4-7Q9BYR0 210 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 NXF2Q9GZY0 626 aaKnown RBP7.04□□□□□ -1.28
DHFR-202ENST00000504396 GABARAPL1Q9H0R8 117 aa7.04□□□□□ -1.28
DHFR-202ENST00000504396 ZNF107Q9UII5 783 aaPredicted RBP7.04□□□□□ -1.28
DHFR-202ENST00000504396 IGHV3-43A0A0B4J1X8 118 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 TRAV24A0A0B4J272 114 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 DAPL1A0PJW8 107 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 SULT1B1O43704 296 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 PLA2G1BP04054 148 aaKnown RBP7.03□□□□□ -1.28
DHFR-202ENST00000504396 IGF1P05019 195 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 IGHV3-43DP0DP04 118 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 PSMB8P28062 276 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 ZP1P60852 638 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 GNB1P62873 340 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 RUNX1Q01196 453 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 CFHR3Q02985 330 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 ZNF85Q03923 595 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 RSU1Q15404 277 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 MMDQ15546 238 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 KISS1Q15726 138 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 PIGYQ3MUY2 71 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 LAIR2Q6ISS4 152 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 FAM53AQ6NSI3 398 aaPredicted RBP7.03□□□□□ -1.28
DHFR-202ENST00000504396 SERPINA12Q8IW75 414 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 OR10K1Q8NGX5 313 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 PLPPR1Q8TBJ4 325 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 MYOZ3Q8TDC0 251 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 CCDC107Q8WV48 283 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 TNFAIP8L1Q8WVP5 186 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 TSEN15Q8WW01 171 aaKnown RBP7.03□□□□□ -1.28
DHFR-202ENST00000504396 RTN4IP1Q8WWV3 396 aaPredicted RBP7.03□□□□□ -1.28
DHFR-202ENST00000504396 FCGR1BQ92637 280 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 RBMXL1Q96E39 390 aaKnown RBP7.03□□□□□ -1.28
DHFR-202ENST00000504396 UBE2E2Q96LR5 201 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 SLIRPQ9GZT3 109 aaKnown RBP7.03□□□□□ -1.28
DHFR-202ENST00000504396 GHITMQ9H3K2 345 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 RIBC2Q9H4K1 309 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 DUSP21Q9H596 190 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 IFT22Q9H7X7 185 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 RAB9BQ9NP90 201 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 PARP11Q9NR21 331 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 CCDC59Q9P031 241 aaKnown RBP7.03□□□□□ -1.28
DHFR-202ENST00000504396 VSIG4Q9Y279 399 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 TPRKBQ9Y3C4 175 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 WSB1Q9Y6I7 421 aa7.03□□□□□ -1.28
DHFR-202ENST00000504396 DYNC2H1Q8NCM8 4307 aaKnown RBP7.02□□□□□ -1.28
DHFR-202ENST00000504396 ZNF736B4DX44 427 aaPredicted RBP7.02□□□□□ -1.29
DHFR-202ENST00000504396 J3QLW9 94 aa7.02□□□□□ -1.29
DHFR-202ENST00000504396 JTBO76095 146 aa7.02□□□□□ -1.29
DHFR-202ENST00000504396 ZNF19P17023 458 aa7.02□□□□□ -1.29
DHFR-202ENST00000504396 ETV6P41212 452 aa7.02□□□□□ -1.29
DHFR-202ENST00000504396 SLURP1P55000 103 aa7.02□□□□□ -1.29
DHFR-202ENST00000504396 F2RL1P55085 397 aa7.02□□□□□ -1.29
DHFR-202ENST00000504396 NANOS3P60323 173 aaKnown RBP7.02□□□□□ -1.29
DHFR-202ENST00000504396 ZNF45Q02386 682 aa7.02□□□□□ -1.29
DHFR-202ENST00000504396 MRPL28Q13084 256 aaKnown RBP7.02□□□□□ -1.29
DHFR-202ENST00000504396 TMEM30BQ3MIR4 351 aa7.02□□□□□ -1.29
DHFR-202ENST00000504396 C6orf183Q5T699 404 aa7.02□□□□□ -1.29
DHFR-202ENST00000504396 ASPHD1Q5U4P2 390 aa7.02□□□□□ -1.29
DHFR-202ENST00000504396 PARP16Q8N5Y8 322 aa7.02□□□□□ -1.29
DHFR-202ENST00000504396 SUMF2Q8NBJ7 301 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms