RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 A0A1W2PPE3 182 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 J3QR06 171 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 BET1O15155 118 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 ZBTB25P24278 435 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 PPP1CCP36873 323 aaKnown RBP8.14□□□□□ -1.11
NUP54-203ENST00000504173 ARPC4P59998 168 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 MRPS10P82664 201 aaKnown RBP8.14□□□□□ -1.11
NUP54-203ENST00000504173 HERPUD1Q15011 391 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 Q3ZCU0 254 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 MORN2Q502X0 79 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 IGSF11Q5DX21 431 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 C9orf139Q6ZV77 190 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 HOGA1Q86XE5 327 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 BCL6BQ8N143 479 aaPredicted RBP8.14□□□□□ -1.11
NUP54-203ENST00000504173 BEND2Q8NDZ0 799 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 BEST4Q8NFU0 473 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 OR10X1Q8NGY0 326 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 FCAMRQ8WWV6 532 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 ABHD1Q96SE0 405 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 CABLES2Q9BTV7 478 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 MMP28Q9H239 520 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 PTTG2Q9NZH5 202 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 OR1A1Q9P1Q5 309 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 ANXA10Q9UJ72 324 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 PSG11Q9UQ72 335 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 FAM96BQ9Y3D0 163 aa8.14□□□□□ -1.11
NUP54-203ENST00000504173 TBL2Q9Y4P3 447 aaKnown RBP8.14□□□□□ -1.11
NUP54-203ENST00000504173 AMMECR1Q9Y4X0 333 aaPredicted RBP8.14□□□□□ -1.11
NUP54-203ENST00000504173 SOX21Q9Y651 276 aaPredicted RBP8.14□□□□□ -1.11
NUP54-203ENST00000504173 IGKV1-6A0A0C4DH72 117 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 A0A0U1RQK1 487 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 GABARAPH6UMI1 98 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 YPEL1O60688 119 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 DIRAS3O95661 229 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 IGLV1-47P01700 117 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 FBP1P09467 338 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 CTXN2P0C2S0 81 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 HTR1DP28221 377 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 RCVRNP35243 200 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 CEACAM6P40199 344 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 DGCR2P98153 550 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 HLA-DRB5Q30154 266 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 SPANXN2Q5MJ10 180 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 MINOS1Q5TGZ0 78 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 LHFPL4Q7Z7J7 247 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 CCDC190Q86UF4 302 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 C8orf31Q8N9H6 132 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 OR2AK2Q8NG84 335 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 OR4P4Q8NGL7 312 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 OR52I2Q8NH67 350 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 OR10J5Q8NHC4 309 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 SNAPC3Q92966 411 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 ZDHHC16Q969W1 377 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 YPEL2Q96QA6 119 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 SLC6A7Q99884 636 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 SOSTQ9BQB4 213 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 GINS4Q9BRT9 223 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 ABHD14AQ9BUJ0 271 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 ZNRD1Q9P1U0 126 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 ANAPC10Q9UM13 185 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 MINOS1-NBL1R4GNA1 71 aa8.13□□□□□ -1.11
NUP54-203ENST00000504173 TRBV6-7A0A0A0MS04 114 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 MDFIC2A0A1B0GVS7 189 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 LEUTXA8MZ59 168 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 CTDSPLO15194 276 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 SLC31A2O15432 143 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 RBBP9O75884 186 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 IL3RAP26951 378 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 CEACAM3P40198 252 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 TAS2R46P59540 309 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 ACTBP60709 375 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 ACTG1P63261 375 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 DEFB112Q30KQ8 113 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 FBLN7Q53RD9 439 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 PYDC2Q56P42 97 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 CT45A1Q5HYN5 189 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 LY6G6FQ5SQ64 297 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 RBMS3Q6XE24 437 aaKnown RBP8.12□□□□□ -1.11
NUP54-203ENST00000504173 SLC25A48Q6ZT89 311 aaKnown RBP8.12□□□□□ -1.11
NUP54-203ENST00000504173 LINC00311Q8N616 119 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 SIGLECL1Q8N7X8 197 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 ZNF439Q8NDP4 499 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 OR5H2Q8NGV7 314 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 CT45A3Q8NHU0 189 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 SMIM4Q8WVI0 70 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 EDARADDQ8WWZ3 215 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 CREB3L1Q96BA8 519 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 PARP12Q9H0J9 701 aaKnown RBP8.12□□□□□ -1.11
NUP54-203ENST00000504173 NECAP2Q9NVZ3 263 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 RDH8Q9NYR8 311 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 DPM3Q9P2X0 92 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 MTFP1Q9UDX5 166 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 HILPDAQ9Y5L2 63 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 V9GYH0 126 aa8.12□□□□□ -1.11
NUP54-203ENST00000504173 BUB1B-PAK6H3BSN5 160 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 ST8SIA5O15466 376 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 NAT1P18440 290 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 PTBP1P26599 531 aaKnown RBP eCLIP8.11□□□□□ -1.115e-7■■■■□ 20.9
NUP54-203ENST00000504173 HLA-DMAP28067 261 aa8.11□□□□□ -1.11
NUP54-203ENST00000504173 ETV6P41212 452 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms