RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 H1F0P07305 194 aaKnown RBP5.59□□□□□ -1.51
CLCN3-203ENST00000502998 CD34P28906 385 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 GLRXP35754 106 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 SRP14P37108 136 aaKnown RBP5.59□□□□□ -1.51
CLCN3-203ENST00000502998 GFRA1P56159 465 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 RPL27P61353 136 aaKnown RBP5.59□□□□□ -1.51
CLCN3-203ENST00000502998 HLA-DRB3P79483 266 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 SRSF2Q01130 221 aaKnown RBP5.59□□□□□ -1.51
CLCN3-203ENST00000502998 ZNF92Q03936 586 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 SSBP1Q04837 148 aaKnown RBP5.59□□□□□ -1.51
CLCN3-203ENST00000502998 FOXL1Q12952 345 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 KLRD1Q13241 179 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 PAFAH1B3Q15102 231 aaKnown RBP5.59□□□□□ -1.51
CLCN3-203ENST00000502998 PMVKQ15126 192 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 HLA-BQ31612 363 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 COX20Q5RI15 118 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 BVES-AS1Q5T3Y7 98 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 C9orf57Q5W0N0 161 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 TXNDC8Q6A555 127 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 ABHD17CQ6PCB6 329 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 DPPA3Q6W0C5 159 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 C16orf82Q7Z2V1 217 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 CEACAM19Q7Z692 300 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 SLC35F2Q8IXU6 374 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 OR4F17Q8NGA8 305 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 OR6T1Q8NGN1 323 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 OR5AR1Q8NGP9 310 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 OR51E1Q8TCB6 317 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 TWIST2Q8WVJ9 160 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 ZNRF4Q8WWF5 429 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 CLDN23Q96B33 292 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 HSH2DQ96JZ2 352 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 SGK494Q96LW2 274 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 OR4F4Q96R69 305 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 C19orf24Q9BVV8 132 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 GGTLC1Q9BX51 225 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 IFI27L2Q9H2X8 130 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 FAM124BQ9H5Z6 455 aaPredicted RBP5.59□□□□□ -1.51
CLCN3-203ENST00000502998 UBE2TQ9NPD8 197 aaPredicted RBP5.59□□□□□ -1.51
CLCN3-203ENST00000502998 EHFQ9NZC4 300 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 FREM2Q5SZK8 3169 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 NBEAQ8NFP9 2946 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 APC2O95996 2303 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 ACACAQ13085 2346 aa5.59□□□□□ -1.51
CLCN3-203ENST00000502998 UNC79Q9P2D8 2635 aa5.59□□□□□ -1.52
CLCN3-203ENST00000502998 ASH1LQ9NR48 2969 aaKnown RBP5.58□□□□□ -1.52
CLCN3-203ENST00000502998 ANK1P16157 1881 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 IGSF10Q6WRI0 2623 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 TEX48A0A1B0GUV7 120 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 A0A1W2PRD5 423 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 C9orf118A6NHY6 69 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 MSGN1A6NI15 193 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 FOXI3A8MTJ6 420 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-203ENST00000502998 H3BRM9 83 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 DNPH1O43598 174 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 SYNGR1O43759 233 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 GCM2O75603 506 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-203ENST00000502998 IGHA1P01876 353 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 HLA-DRB1P01911 266 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 CRYGDP07320 174 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 NGFRP08138 427 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 SBK3P0C264 359 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 PVRP15151 417 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 GPD1P21695 349 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 SDHBP21912 280 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 NTSP30990 170 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 CDKN2AP42771 156 aaKnown RBP5.58□□□□□ -1.52
CLCN3-203ENST00000502998 TSFMP43897 325 aaKnown RBP5.58□□□□□ -1.52
CLCN3-203ENST00000502998 GPR1P46091 355 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 SLC25A1P53007 311 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 TAS2R46P59540 309 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 PSG4Q00888 419 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 DUSP2Q05923 314 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 LRRC75BQ2VPJ9 315 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 MIDNQ504T8 468 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 PRR30Q53SZ7 412 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-203ENST00000502998 SFXN4Q6P4A7 337 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 ZNF761Q86XN6 746 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-203ENST00000502998 OR4N5Q8IXE1 308 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 TMEM123Q8N131 208 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 ZIC4Q8N9L1 334 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 SYT8Q8NBV8 401 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 OR2K2Q8NGT1 345 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 PTPMT1Q8WUK0 201 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-203ENST00000502998 PPP1R1CQ8WVI7 109 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 DERL3Q96Q80 235 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 SDF2Q99470 211 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 SPIN2AQ99865 258 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 SPIN2BQ9BPZ2 258 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 KLF16Q9BXK1 252 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-203ENST00000502998 OR2D2Q9H210 308 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 NUDT4Q9NZJ9 180 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 FLRT3Q9NZU0 649 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 KLHL13Q9P2N7 655 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 KCNS2Q9ULS6 477 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 FOXA2Q9Y261 457 aaPredicted RBP5.58□□□□□ -1.52
CLCN3-203ENST00000502998 LOXL2Q9Y4K0 774 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 IER3IP1Q9Y5U9 82 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 ZNF780BQ9Y6R6 833 aa5.58□□□□□ -1.52
CLCN3-203ENST00000502998 TICRRQ7Z2Z1 1910 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms