RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 FAM216AQ8WUB2 273 aa18.31■□□□□ 0.52
PTPN13-205ENST00000502971 RBPMSQ93062 196 aaKnown RBP18.31■□□□□ 0.52
PTPN13-205ENST00000502971 GPHA2Q96T91 129 aa18.31■□□□□ 0.52
PTPN13-205ENST00000502971 DCTN5Q9BTE1 182 aa18.31■□□□□ 0.52
PTPN13-205ENST00000502971 DCAF16Q9NXF7 216 aa18.31■□□□□ 0.52
PTPN13-205ENST00000502971 UBQLN2Q9UHD9 624 aa18.31■□□□□ 0.52
PTPN13-205ENST00000502971 NKX6-3A6NJ46 265 aa18.3■□□□□ 0.52
PTPN13-205ENST00000502971 DEFB108AA8MXU0 73 aa18.3■□□□□ 0.52
PTPN13-205ENST00000502971 SIGLEC5O15389 551 aa18.3■□□□□ 0.52
PTPN13-205ENST00000502971 RLN2P04090 185 aa18.3■□□□□ 0.52
PTPN13-205ENST00000502971 LOXP28300 417 aaPredicted RBP18.3■□□□□ 0.52
PTPN13-205ENST00000502971 GNMTQ14749 295 aa18.3■□□□□ 0.52
PTPN13-205ENST00000502971 SMCO1Q147U7 214 aa18.3■□□□□ 0.52
PTPN13-205ENST00000502971 SLC7A5P1Q8MH63 180 aa18.3■□□□□ 0.52
PTPN13-205ENST00000502971 DRAM1Q8N682 238 aa18.3■□□□□ 0.52
PTPN13-205ENST00000502971 CCL13Q99616 98 aa18.3■□□□□ 0.52
PTPN13-205ENST00000502971 TMEM106BQ9NUM4 274 aa18.3■□□□□ 0.52
PTPN13-205ENST00000502971 OR5AC2Q9NZP5 309 aa18.3■□□□□ 0.52
PTPN13-205ENST00000502971 JPT1Q9UK76 154 aa18.3■□□□□ 0.52
PTPN13-205ENST00000502971 RELNP78509 3460 aa18.3■□□□□ 0.52
PTPN13-205ENST00000502971 RNF212BA8MTL3 300 aa18.29■□□□□ 0.52
PTPN13-205ENST00000502971 BCL2L11O43521 198 aa18.29■□□□□ 0.52
PTPN13-205ENST00000502971 CFDP00746 253 aaPredicted RBP18.29■□□□□ 0.52
PTPN13-205ENST00000502971 MUC15Q8N387 334 aa18.29■□□□□ 0.52
PTPN13-205ENST00000502971 RFESDQ8TAC1 157 aa18.29■□□□□ 0.52
PTPN13-205ENST00000502971 SPIN2AQ99865 258 aa18.29■□□□□ 0.52
PTPN13-205ENST00000502971 SPIN2BQ9BPZ2 258 aa18.29■□□□□ 0.52
PTPN13-205ENST00000502971 PPIAL4EA0A075B759 164 aa18.29■□□□□ 0.52
PTPN13-205ENST00000502971 PPIAL4DF5H284 164 aa18.29■□□□□ 0.52
PTPN13-205ENST00000502971 PPIAL4FP0DN26 164 aa18.29■□□□□ 0.52
PTPN13-205ENST00000502971 VDAC1P21796 283 aa18.29■□□□□ 0.52
PTPN13-205ENST00000502971 PPP1CCP36873 323 aaKnown RBP18.29■□□□□ 0.52
PTPN13-205ENST00000502971 OR51H1Q8NH63 302 aa18.29■□□□□ 0.52
PTPN13-205ENST00000502971 OR1S1Q8NH92 325 aa18.29■□□□□ 0.52
PTPN13-205ENST00000502971 PLEKHF2Q9H8W4 249 aa18.29■□□□□ 0.52
PTPN13-205ENST00000502971 LIN7CQ9NUP9 197 aaKnown RBP18.29■□□□□ 0.52
PTPN13-205ENST00000502971 PPIAL4AQ9Y536 164 aa18.29■□□□□ 0.52
PTPN13-205ENST00000502971 ICE1Q9Y2F5 2266 aa18.28■□□□□ 0.52
PTPN13-205ENST00000502971 HIVEP3Q5T1R4 2406 aa18.28■□□□□ 0.52
PTPN13-205ENST00000502971 CACNA1DQ01668 2161 aa18.28■□□□□ 0.52
PTPN13-205ENST00000502971 KIAA2026Q5HYC2 2103 aa18.28■□□□□ 0.52
PTPN13-205ENST00000502971 F2RL2O00254 374 aa18.28■□□□□ 0.52
PTPN13-205ENST00000502971 DEDDO75618 318 aa18.28■□□□□ 0.52
PTPN13-205ENST00000502971 CGB3P0DN86 165 aa18.28■□□□□ 0.52
PTPN13-205ENST00000502971 CGB7P0DN87 165 aa18.28■□□□□ 0.52
PTPN13-205ENST00000502971 SELLP14151 372 aa18.28■□□□□ 0.52
PTPN13-205ENST00000502971 EDARADDQ8WWZ3 215 aa18.28■□□□□ 0.52
PTPN13-205ENST00000502971 CCL17Q92583 94 aa18.28■□□□□ 0.52
PTPN13-205ENST00000502971 AQP10Q96PS8 301 aa18.28■□□□□ 0.52
PTPN13-205ENST00000502971 OR2D2Q9H210 308 aa18.28■□□□□ 0.52
PTPN13-205ENST00000502971 CLDN14O95500 239 aa18.27■□□□□ 0.52
PTPN13-205ENST00000502971 SERPINE2P07093 398 aa18.27■□□□□ 0.52
PTPN13-205ENST00000502971 OR4D5Q8NGN0 318 aa18.27■□□□□ 0.52
PTPN13-205ENST00000502971 A0A1B0GW55 424 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 CLEC18AA5D8T8 446 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 YPEL1O60688 119 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 MBPP02686 304 aaPredicted RBP18.26■□□□□ 0.51
PTPN13-205ENST00000502971 DUX4L2P0CJ85 424 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 DUX4L3P0CJ86 424 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 DUX4L4P0CJ87 422 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 DUX4L5P0CJ88 424 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 DUX4L6P0CJ89 424 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 DUX4L7P0CJ90 424 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 UBA52P62987 128 aaKnown RBP18.26■□□□□ 0.51
PTPN13-205ENST00000502971 DUX4L9Q6RFH8 374 aaPredicted RBP18.26■□□□□ 0.51
PTPN13-205ENST00000502971 OR8H3Q8N146 312 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 FAM216BQ8N7L0 139 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 CLEC18CQ8NCF0 446 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 RRNAD1Q96FB5 475 aaKnown RBP18.26■□□□□ 0.51
PTPN13-205ENST00000502971 YPEL2Q96QA6 119 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 ARPC5LQ9BPX5 153 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 CALYQ9NYX4 217 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 DUX4Q9UBX2 424 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 LSM5Q9Y4Y9 91 aaKnown RBP18.26■□□□□ 0.51
PTPN13-205ENST00000502971 DIDO1Q9BTC0 2240 aaKnown RBP18.26■□□□□ 0.51
PTPN13-205ENST00000502971 DSCAMO60469 2012 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 TRGV10A0A0A0MS01 117 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 IGHV3-43A0A0B4J1X8 118 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 SCGB1D2O95969 90 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 IGHV3-43DP0DP04 118 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 NMSQ5H8A3 153 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 FAM53AQ6NSI3 398 aaPredicted RBP18.26■□□□□ 0.51
PTPN13-205ENST00000502971 FOXRED2Q8IWF2 684 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 OR52M1Q8NGK5 317 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 RNF150Q9ULK6 438 aa18.26■□□□□ 0.51
PTPN13-205ENST00000502971 HCFC1P51610 2035 aa18.25■□□□□ 0.51
PTPN13-205ENST00000502971 IGHV1-69-2A0A0G2JMI3 117 aa18.25■□□□□ 0.51
PTPN13-205ENST00000502971 K7EPK0 472 aa18.25■□□□□ 0.51
PTPN13-205ENST00000502971 ST8SIA3O43173 380 aa18.25■□□□□ 0.51
PTPN13-205ENST00000502971 EIF4EBP1Q13541 118 aaPredicted RBP18.25■□□□□ 0.51
PTPN13-205ENST00000502971 MORN2Q502X0 79 aa18.25■□□□□ 0.51
PTPN13-205ENST00000502971 FAM71E2Q8N5Q1 922 aa18.25■□□□□ 0.51
PTPN13-205ENST00000502971 CORO2AQ92828 525 aa18.25■□□□□ 0.51
PTPN13-205ENST00000502971 GNG12Q9UBI6 72 aa18.25■□□□□ 0.51
PTPN13-205ENST00000502971 KBTBD11-OT1A0A1B0GTJ5 212 aa18.24■□□□□ 0.51
PTPN13-205ENST00000502971 MEX3AA1L020 520 aaKnown RBP18.24■□□□□ 0.51
PTPN13-205ENST00000502971 E5RGE8 158 aa18.24■□□□□ 0.51
PTPN13-205ENST00000502971 TMPRSS2O15393 492 aa18.24■□□□□ 0.51
PTPN13-205ENST00000502971 KCNAB3O43448 404 aa18.24■□□□□ 0.51
PTPN13-205ENST00000502971 PPOXP50336 477 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms